RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SPINK14Q6IE38 97 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 FIGLAQ6QHK4 219 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 CDC20BQ86Y33 519 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 PQLC3Q8N755 202 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 POC5Q8NA72 575 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 DTX3LQ8TDB6 740 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 ART5Q96L15 291 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF285Q96NJ3 590 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 CCM2Q9BSQ5 444 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 XPO4Q9C0E2 1151 aaKnown RBP4.64□□□□□ -1.67
CLIP1-207ENST00000536634 EGLN1Q9GZT9 426 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 DPAGT1Q9H3H5 408 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 KCNJ16Q9NPI9 418 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 STMN3Q9NZ72 180 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 TMEM181Q9P2C4 612 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 CACNG5Q9UF02 275 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 MGAM2Q2M2H8 2515 aa4.64□□□□□ -1.67
CLIP1-207ENST00000536634 IGLV3-12A0A075B6K2 115 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 LOC102723996A0A087X1L8 192 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 IGHV3-20A0A0C4DH32 117 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 IGHV4-61A0A0C4DH41 118 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 A0A1B0GTH9 108 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 A8MUI8 341 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 TTI1O43156 1089 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 XRCC3O43542 346 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 IGHV4-59P01825 116 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 VPREB1P12018 145 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 EEF1DP29692 281 aaKnown RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 VSX2P58304 361 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 B3GALT5-AS1P59052 145 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 PPIDQ08752 370 aaKnown RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ITGA9Q13797 1035 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 FASTKQ14296 549 aaKnown RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 KRT31Q15323 416 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 OR1C1Q15619 314 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ITPRIPL1Q6GPH6 555 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 FRMPD2BQ6IN97 320 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 TEX38Q6PEX7 206 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 KDELC1Q6UW63 502 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 SLC16A9Q7RTY1 509 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 GLT6D1Q7Z4J2 308 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 GALNTL5Q7Z4T8 443 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF554Q86TJ5 538 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 LINC00346Q8IVM7 164 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 C2orf73Q8N5S3 287 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 LINC01555Q8NAE3 123 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 CCNYQ8ND76 341 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 FAM57AQ8TBR7 257 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 BLOC1S5Q8TDH9 187 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 RNF128Q8TEB7 428 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 TFGQ92734 400 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 TAF15Q92804 592 aaKnown RBP eCLIP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 FAF2Q96CS3 445 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 TRIM44Q96DX7 344 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 IMMP1LQ96LU5 166 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 C10orf90Q96M02 699 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 CDRT15Q96T59 188 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 SELENOSQ9BQE4 189 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 SLC25A51Q9H1U9 297 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 FAM96AQ9H5X1 160 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF282Q9UDV7 671 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 CIDEBQ9UHD4 219 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 GNPTGQ9UJJ9 305 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 OSGIN1Q9UJX0 560 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 TDRKHQ9Y2W6 561 aaKnown RBP4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ARL5AQ9Y689 179 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ROS1P08922 2347 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 CMYA5Q8N3K9 4069 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 HEATR5BQ9P2D3 2071 aa4.63□□□□□ -1.67
CLIP1-207ENST00000536634 ABCA1O95477 2261 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 IGKV3D-15A0A087WSY6 115 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 LOC285095A0A1B0GVY8 99 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 hCG_1807616A0A1W2PRN6 198 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 HYKKA2RU49 373 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 RNF212BA8MTL3 300 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 PRR32B1ATL7 298 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 CCL22O00626 93 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 SRP72O76094 671 aaKnown RBP4.62□□□□□ -1.67
CLIP1-207ENST00000536634 TBX6O95947 436 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-207ENST00000536634 RAF1P04049 648 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF24P17028 368 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 SHMT2P34897 504 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 RFC3P40938 356 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 PRKCIP41743 596 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 NKX2-1P43699 371 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-207ENST00000536634 CD151P48509 253 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 EMP2P54851 167 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 NUP107P57740 925 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 CX3CL1P78423 397 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 XIAPP98170 497 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 DMTNQ08495 405 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 AP1B1Q10567 949 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 IGSF11Q5DX21 431 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 ACER2Q5QJU3 275 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 H3F3CQ6NXT2 135 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 BHLHB9Q6PI77 547 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 TMEM205Q6UW68 189 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 ARSKQ6UWY0 536 aa4.62□□□□□ -1.67
CLIP1-207ENST00000536634 LANCL3Q6ZV70 420 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms