RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 JADE3Q92613 823 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 STMN2Q93045 179 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 FAM162AQ96A26 154 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 OTUB1Q96FW1 271 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 RSRC1Q96IZ7 334 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 MS4A4EQ96PG1 132 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 THUMPD1Q9NXG2 353 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 CNIH4Q9P003 139 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 CDC42EP3Q9UKI2 254 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 CAMK2AQ9UQM7 478 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 ERVK-19Q9WJR5 959 aa10.22□□□□□ -0.77
TRAPPC4-213ENST00000533149 TCRBV5S2A0A599 114 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 TCRBV3S1A0A5B6 114 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 PRAMEF27A3QJZ7 478 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 LRRC3CA6NJW4 275 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 DUXAA6NLW8 204 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SIAH2O43255 324 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 DYRK3O43781 588 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 COQ9O75208 318 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 FKBP6O75344 327 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 GCM2O75603 506 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 PSMG1O95456 288 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 ALOX5P09917 674 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 NR2F1P10589 423 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 ACP2P11117 423 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 CRYGSP22914 178 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 GDF1P27539 372 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SSTR4P31391 388 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 PCYT1AP49585 367 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 MAPK11Q15759 364 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 ETFDHQ16134 617 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SYPL1Q16563 259 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 EXOSC6Q5RKV6 272 aaKnown RBP10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 VASNQ6EMK4 673 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 AAGABQ6PD74 315 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC44A2Q8IWA5 706 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 DND1Q8IYX4 353 aaKnown RBP10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 ANKFN1Q8N957 763 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 CDRT4Q8N9R6 151 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC16A11Q8NCK7 471 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR7G1Q8NGA0 311 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR14A16Q8NHC5 309 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 PAQR8Q8TEZ7 354 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC38A5Q8WUX1 472 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 PYDC1Q8WXC3 89 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC9A6Q92581 669 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 JSRP1Q96MG2 331 aaPredicted RBP10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 WFIKKN1Q96NZ8 548 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 TM9SF2Q99805 663 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 REG4Q9BYZ8 158 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 S100A14Q9HCY8 104 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 SH2D2AQ9NP31 389 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 EML6Q6ZMW3 1958 aa10.21□□□□□ -0.78
TRAPPC4-213ENST00000533149 DSCAMO60469 2012 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 TMEM247A6NEH6 219 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 A8MXE2 369 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 C5orf58C9J3I9 102 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 M0QX08 132 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ATP6V1G2O95670 118 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 AGR2O95994 175 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 SERPINA1P01009 418 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 CLPSP04118 112 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 GABRA3P34903 492 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 THBS2P35442 1172 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 MAP3K8P41279 467 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 EMDP50402 254 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 NR1H2P55055 460 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 MRPS22P82650 360 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 FOXF2Q12947 444 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 DUSP5Q16690 384 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 CLEC12BQ2HXU8 276 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF791Q3KP31 576 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 MTX3Q5HYI7 312 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 NHSL2Q5HYW2 709 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ATAD3BQ5T9A4 648 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 INTS11Q5TA45 600 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 PRAMEF20Q5VT98 475 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 REEP3Q6NUK4 255 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 CCDC80Q76M96 950 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC30A8Q8IWU4 369 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ADGRG5Q8IZF4 528 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 METTL25Q8N6Q8 603 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF321PQ8N8H1 164 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF615Q8N8J6 731 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 C9orf106Q8NAJ2 232 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR52E4Q8NGH9 312 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC22A8Q8TCC7 542 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZPLD1Q8TCW7 415 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 CANT1Q8WVQ1 401 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 DUS3LQ96G46 650 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 TMEM19Q96HH6 336 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 FBXL20Q96IG2 436 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 MED18Q9BUE0 208 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR8D2Q9GZM6 311 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR10A5Q9H207 317 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 PIGUQ9H490 435 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 DCLRE1BQ9H816 532 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 FOLH1BQ9HBA9 442 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms