RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 LRRC37A5PQ49AS3 106 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 OLFML2AQ68BL7 652 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 PYHIN1Q6K0P9 492 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 IKBIPQ70UQ0 350 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 FANK1Q8TC84 345 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 SMAP2Q8WU79 429 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 ACOT12Q8WYK0 555 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 FATE1Q969F0 183 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 LRRC46Q96FV0 321 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 KCNJ15Q99712 375 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 DDX31Q9H8H2 851 aaKnown RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 SLCO1C1Q9NYB5 712 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 WSB2Q9NYS7 404 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-210ENST00000528516 MED11Q9P086 117 aa16.68■□□□□ 0.26
LTBP3-210ENST00000528516 GSTM3P21266 225 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 MAOBP27338 520 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 STARP49675 285 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ALKBH2Q6NS38 261 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 OR2T33Q8NG76 320 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 DTD2Q96FN9 168 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 FCRL1Q96LA6 429 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 NPAS1Q99742 590 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 LDAHQ9H6V9 325 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 NTNG1Q9Y2I2 539 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 NBASA2RRP1 2371 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 PRODHO43272 600 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ACP2P11117 423 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 AKT2P31751 481 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 CCR2P41597 374 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 SLC1A3P43003 542 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 RAB28P51157 221 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 SKP1P63208 163 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 DGCR2P98153 550 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 RAB40BQ12829 278 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ENPP2Q13822 863 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 PON3Q15166 354 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 GXYLT1Q4G148 440 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 PGBD2Q6P3X8 592 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ESPNLQ6ZVH7 1005 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 SLC9B2Q86UD5 537 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF248Q8NDW4 579 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 UBTD2Q8WUN7 234 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 CHFRQ96EP1 664 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ADAD1Q96M93 576 aaKnown RBP16.67■□□□□ 0.26
LTBP3-210ENST00000528516 HSPA12BQ96MM6 686 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 RNF32Q9H0A6 362 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 WDR87Q6ZQQ6 2873 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 MEIKINA0A087WXM9 373 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 WDPCPO95876 746 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 VEGFCP49767 419 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 PSMD4P55036 377 aaKnown RBP16.67■□□□□ 0.26
LTBP3-210ENST00000528516 B4GALNT1Q00973 533 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
LTBP3-210ENST00000528516 OCLNQ16625 522 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 SWI5Q1ZZU3 235 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 MPP7Q5T2T1 576 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 FAM27D1Q5T7N8 215 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 OR52E2Q8NGJ4 325 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 SLC7A13Q8TCU3 470 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 ABHD1Q96SE0 405 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 TRIM36Q9NQ86 728 aa16.67■□□□□ 0.26
LTBP3-210ENST00000528516 H7C0S8 307 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 FGF19O95750 216 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 EIF4EBP2Q13542 120 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ETFDHQ16134 617 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 HAGHLQ6PII5 290 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 LRRN1Q6UXK5 716 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 PRSS45Q7RTY3 260 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ACBD7Q8N6N7 88 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 LINC00469Q8N7U9 141 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 OR56A1Q8NGH5 318 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 MSRAQ9UJ68 235 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 AUP1Q9Y679 476 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 SDK2Q58EX2 2172 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 C7orf66A4D0T2 115 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 LRRN3E7EW58 273 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 DVL2O14641 736 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ARPC1BO15143 372 aaKnown RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 FZD7O75084 574 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 KLF8O95600 359 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 HPXP02790 462 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 GLAP06280 429 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 S100A9P06702 114 aaKnown RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 PTBP1P26599 531 aaKnown RBP eCLIP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 OR10A3P58181 314 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 IRF5Q13568 498 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 FGF13Q92913 245 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 MMABQ96EY8 250 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 BTBD1Q9H0C5 482 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 LRRN3Q9H3W5 708 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 FBXL3Q9UKT7 428 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 SLC7A7Q9UM01 511 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 LIPT1Q9Y234 373 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 RNASET2O00584 256 aaKnown RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 PLGP00747 810 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-210ENST00000528516 ZNF3P17036 446 aa16.66■□□□□ 0.26
LTBP3-210ENST00000528516 NFYAP23511 347 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms