RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 GPR107Q5VW38 600 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 HACD4Q5VWC8 232 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ANKRD22Q5VYY1 191 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 LPCAT4Q643R3 524 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 NCBP2-AS2Q69YL0 99 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ZNF470Q6ECI4 717 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 FAM53AQ6NSI3 398 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 TMEM53Q6P2H8 277 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SLC39A4Q6P5W5 647 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 AFTPHQ6ULP2 937 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 UNC5DQ6UXZ4 953 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 PID1Q7Z2X4 250 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 LUZP2Q86TE4 346 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ITIH5Q86UX2 942 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CDK20Q8IZL9 346 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 LYG1Q8N1E2 194 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CBR4Q8N4T8 237 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 LINC00471Q8N535 108 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CERS5Q8N5B7 392 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ZNF781Q8N8C0 355 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 MAPKAPK5-AS1Q8N8E1 139 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ZNF557Q8N988 423 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 RNF149Q8NC42 400 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 OR56A4Q8NGH8 313 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ANGPTL6Q8NI99 470 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 GRHL3Q8TE85 626 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SSMEM1Q8WWF3 244 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CAPSLQ8WWF8 208 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ATL1Q8WXF7 558 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 DEDD2Q8WXF8 326 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 TMEM190Q8WZ59 177 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ROBO4Q8WZ75 1007 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 PROX1Q92786 737 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 NT5C3BQ969T7 300 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SPSB1Q96BD6 273 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 C12orf43Q96C57 262 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 LRRC58Q96CX6 371 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CXorf40BQ96DE9 158 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 TMA16Q96EY4 203 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 GIMAP5Q96F15 307 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 OTUB1Q96FW1 271 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SMARCD1Q96GM5 515 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CPB2Q96IY4 423 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ELMO2Q96JJ3 720 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ART5Q96L15 291 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 Q96MT0 163 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SERPINB11Q96P15 392 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ATOH8Q96SQ7 321 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SORT1Q99523 831 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CIB1Q99828 191 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ASCL2Q99929 193 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 DDX50Q9BQ39 737 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 APOL2Q9BQE5 337 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 EBF4Q9BQW3 602 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 PYGO2Q9BRQ0 406 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 DCTN5Q9BTE1 182 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 URM1Q9BTM9 101 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 GON7Q9BXV9 100 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SHCBP1LQ9BZQ2 653 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ELOVL4Q9GZR5 314 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 POLR1EQ9GZS1 481 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 LAT2Q9GZY6 243 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 MFSD1Q9H3U5 465 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 FBXO44Q9H4M3 255 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 POMKQ9H5K3 350 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 RPAP3Q9H6T3 665 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 KAT8Q9H7Z6 458 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 GORASP2Q9H8Y8 452 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 UGT1A7Q9HAW7 530 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 UGT1A10Q9HAW8 530 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 UGT1A8Q9HAW9 530 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 FANCEQ9HB96 536 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 C3orf14Q9HBI5 128 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 XPNPEP1Q9NQW7 623 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 IARS2Q9NSE4 1012 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 THUMPD1Q9NXG2 353 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 STMN3Q9NZ72 180 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 FLRT3Q9NZU0 649 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 EMC3Q9P0I2 261 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 WRAP73Q9P2S5 460 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ANKMY1Q9P2S6 941 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 PCSK1NQ9UHG2 260 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ZDHHC2Q9UIJ5 367 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ENPP5Q9UJA9 477 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ZNF221Q9UK13 617 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CDH9Q9ULB4 789 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 AURKCQ9UQB9 309 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 EIF3LQ9Y262 564 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 BTRCQ9Y297 605 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 CAB39Q9Y376 341 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 NAALAD2Q9Y3Q0 740 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 ASB4Q9Y574 426 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 SMCHD1A6NHR9 2005 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 BTAF1O14981 1849 aa2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 XIRP1Q702N8 1843 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-218ENST00000525745 TP53BP1Q12888 1972 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-218ENST00000525745 LOC285556D6RIA3 1793 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms