RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CYB561A3Q8NBI2 242 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 C17orf47Q8NEP4 570 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 OR5T3Q8NGG3 340 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 OR4C6Q8NH72 309 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GRPEL2Q8TAA5 225 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GRHL3Q8TE85 626 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SMAP2Q8WU79 429 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ASB12Q8WXK4 309 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SMPDL3BQ92485 455 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 RFT1Q96AA3 541 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 C4orf36Q96KX1 117 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GFM1Q96RP9 751 aaKnown RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GABRG3Q99928 467 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ZFYVE21Q9BQ24 234 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF559Q9BR84 538 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ERVMER34-1Q9H9K5 563 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 TMEM27Q9HBJ8 222 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GALNT9Q9HCQ5 603 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 MAT2BQ9NZL9 334 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FBXL4Q9UKA2 621 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FBXL21Q9UKT6 434 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 A0A0B4J2E0 115 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 A0A1B0GX12 115 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 A0A1W2PQF6 199 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SYNDIG1LA6NDD5 238 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 CYR61O00622 381 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PPP1R3DO95685 299 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF3P17036 446 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 DRD5P21918 477 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ACSL1P33121 698 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 BTG1P62324 171 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GPR18Q14330 331 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PLA1AQ53H76 456 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FBXO46Q6PJ61 603 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 RPTNQ6XPR3 784 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ASB18Q6ZVZ8 466 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ZAR1Q86SH2 424 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FAM3CQ92520 227 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 CNOT9Q92600 299 aaKnown RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PMM1Q92871 262 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 RERGQ96A58 199 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ELSPBP1Q96BH3 223 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PGLYRP3Q96LB9 341 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 BMFQ96LC9 184 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 IGFLR1Q9H665 355 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SLC28A3Q9HAS3 691 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FOLH1BQ9HBA9 442 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 C14orf105Q9NVL8 296 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 DZANK1Q9NVP4 752 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 HAO2Q9NYQ3 351 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FLRT3Q9NZU0 649 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 USP36Q9P275 1121 aaKnown RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SPACA6W5XKT8 324 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 A0A1B0GVC2 190 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 A6NIN4 97 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 CHP2O43745 196 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 CPNE3O75131 537 aaKnown RBP10.23□□□□□ -0.77
HDAC9-228ENST00000524023 ALX3O95076 343 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 RASGRP1O95267 797 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 APBB3O95704 486 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 HK1P19367 917 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 AHCYP23526 432 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 ACVR1BP36896 505 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 RAB25P57735 213 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 GALK2Q01415 458 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 DMKNQ6E0U4 476 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-228ENST00000524023 FAAH2Q6GMR7 532 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 SDE2Q6IQ49 451 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 GPR135Q8IZ08 494 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 SLC44A3Q8N4M1 653 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 SLC2A12Q8TD20 617 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 AKAP1Q92667 903 aaKnown RBP eCLIP10.23□□□□□ -0.77
HDAC9-228ENST00000524023 RSC1A1Q92681 617 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 TNFRSF13CQ96RJ3 184 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
HDAC9-228ENST00000524023 BAIAP2Q9UQB8 552 aa10.23□□□□□ -0.77
HDAC9-228ENST00000524023 A0A1B0GWA3 101 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 SLC9B1P1A6NJY1 282 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ARHGEF9O43307 516 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 EEF1E1O43324 174 aaKnown RBP10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF780AO75290 641 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-228ENST00000524023 GYPBP06028 91 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PEPDP12955 493 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 HOXB2P14652 356 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PVRP15151 417 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PRKCAP17252 672 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 EVI2BP34910 448 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 LSSP48449 732 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 MAB21L1Q13394 359 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 FHL1Q13642 323 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 SLC25A35Q3KQZ1 300 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ACSM3Q53FZ2 586 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 BICRALQ6AI39 1079 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 RTL4Q6ZR62 310 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 SSX6Q7RTT6 188 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 CA13Q8N1Q1 262 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 TEX19Q8NA77 164 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 OR5J2Q8NH18 312 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 TRMT10AQ8TBZ6 339 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms