RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ST13P4Q8IZP2 240 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 RHEBL1Q8TAI7 183 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 FAM45AQ8TCE6 357 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ZFAND2BQ8WV99 257 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF75CPQ92670 426 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 PROX1Q92786 737 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ZBTB9Q96C00 473 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 CHMP6Q96FZ7 201 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 RAX2Q96IS3 184 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 SFXN2Q96NB2 322 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 HBEGFQ99075 208 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 H2AFJQ9BTM1 129 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 OSBPL11Q9BXB4 747 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 PINK1Q9BXM7 581 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 NXF5Q9H1B4 397 aaKnown RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF696Q9H7X3 374 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 METTL7AQ9H8H3 244 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 ACTR8Q9H981 624 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 C14orf119Q9NWQ9 140 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 TRMT6Q9UJA5 497 aaKnown RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 PTBP2Q9UKA9 531 aaKnown RBP5.85□□□□□ -1.47
SDCBP-210ENST00000522843 EMCNQ9ULC0 261 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 CLEC4AQ9UMR7 237 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 COX11Q9Y6N1 276 aa5.85□□□□□ -1.47
SDCBP-210ENST00000522843 A0A088AWK7 358 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 G3V2L1 256 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 TMEM127O75204 238 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SNNO75324 88 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 GCM2O75603 506 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SCAF4O95104 1147 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 NTN1O95631 604 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 RBP1P09455 135 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SBK3P0C264 359 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 PSMB1P20618 241 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 IL11P20809 199 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 HNF1AP20823 631 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF10P21506 573 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 GPX3P22352 226 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 HIST1H1TP22492 207 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 CPN2P22792 545 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 GCKP35557 465 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SERPINB5P36952 375 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 HNRNPH2P55795 449 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 DNAJB13P59910 316 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 NAA20P61599 178 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 RPS13P62277 151 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 PLIN5Q00G26 463 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 HMGCS1Q01581 520 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 GALNT1Q10472 559 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 RCN2Q14257 317 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 FAM83EQ2M2I3 478 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 OR5M10Q6IEU7 315 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 LRRC8EQ6NSJ5 796 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 AAGABQ6PD74 315 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 ISCA2Q86U28 154 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 PLCZ1Q86YW0 608 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 CENPLQ8N0S6 344 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF619Q8N2I2 560 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 GLB1L3Q8NCI6 653 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 BEND2Q8NDZ0 799 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 TTLQ8NG68 377 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 OR6K3Q8NGY3 331 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 STON2Q8WXE9 905 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 KAT2AQ92830 837 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 RHBDF1Q96CC6 855 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 RBM18Q96H35 190 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 C7orf26Q96N11 449 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 MRPL57Q9BQC6 102 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 DERL2Q9GZP9 239 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 OR10A4Q9H209 315 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 CCDC68Q9H2F9 335 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 RPF2Q9H7B2 306 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 NT5DC2Q9H857 520 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 COPS7BQ9H9Q2 264 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 NMRAL1Q9HBL8 299 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 TAS2R13Q9NYV9 303 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 CISD1Q9NZ45 108 aaKnown RBP5.84□□□□□ -1.47
SDCBP-210ENST00000522843 EHD3Q9NZN3 535 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 TMEM216Q9P0N5 145 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SLC17A7Q9P2U7 560 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 SLC17A6Q9P2U8 582 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 HAO1Q9UJM8 370 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 MID2Q9UJV3 735 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 GPR52Q9Y2T5 361 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 ZNF175Q9Y473 711 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 KCNE2Q9Y6J6 123 aa5.84□□□□□ -1.47
SDCBP-210ENST00000522843 ARFGEF3Q5TH69 2177 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 FAM157AC9JC47 383 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 E7EQL1 145 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 GOLGA8RI6L899 631 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SAP18O00422 153 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SEC14L5O43304 696 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SNX3O60493 162 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 EDF1O60869 148 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SS18L1O75177 396 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SH3BGRLO75368 114 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 EEDO75530 441 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 IL33O95760 270 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms