RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PHOSPHO1Q8TCT1 267 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 TAPBPLQ9BX59 468 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 NRSN2Q9GZP1 204 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 WWTR1Q9GZV5 400 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 PLGRKTQ9HBL7 147 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 EXOSC3Q9NQT5 275 aaKnown RBP16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 PCDHGA3Q9Y5H0 932 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 TRAV27A0A087WT01 109 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 A0A087WUJ7 227 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 OR6C76A6NM76 312 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 TO15178 435 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 REM1O75628 298 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 MYL12AP19105 171 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 UGT2B10P36537 528 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 NR0B1P51843 470 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 C1DQ13901 141 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 FAAH2Q6GMR7 532 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 PAQR6Q6TCH4 344 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 THSD4Q6ZMP0 1018 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 OAFQ86UD1 273 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 OR51A7Q8NH64 312 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 IFT27Q9BW83 186 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 OR51E2Q9H255 320 aa16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 HINT3Q9NQE9 182 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-210ENST00000521667 CDC14CA4D256 554 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 GNB5O14775 395 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 APOL3O95236 402 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 NADKO95544 446 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 IL12BP29460 328 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ETV5P41161 510 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ETV1P50549 477 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 FOXL2P58012 376 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 SKP2Q13309 424 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 SSX1Q16384 188 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 CLPPQ16740 277 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 APOOLQ6UXV4 268 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 CXXC5Q7LFL8 322 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ATCAYQ86WG3 371 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 CPOQ8IVL8 374 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 C3orf49Q96BT1 292 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 DCSTAMPQ9H295 470 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 FN3KQ9H479 309 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 SMOC1Q9H4F8 434 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ZBTB20Q9HC78 741 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 CHCHD3Q9NX63 227 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 H2AFY2Q9P0M6 372 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 GTPBP1O00178 669 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ZNF264O43296 627 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 OIP5O43482 229 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ICOSLGO75144 302 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 HBQ1P09105 142 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 AVPR2P30518 371 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 HTR1FP30939 366 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 SERPINB10P48595 397 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 DUSP3P51452 185 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 TUBA1BP68363 451 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 DCDP81605 110 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ANGPT1Q15389 498 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 TIMM50Q3ZCQ8 353 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 PHF19Q5T6S3 580 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 TUBA1AQ71U36 451 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ADCK1Q86TW2 530 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 PPP1R3BQ86XI6 285 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 BBS1Q8NFJ9 593 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 GFM1Q96RP9 751 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 OSGIN1Q9UJX0 560 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 ICAM5Q9UMF0 924 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 CARD8Q9Y2G2 431 aa16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 EXOSC1Q9Y3B2 195 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-210ENST00000521667 LOC100506127A0A0U1RQW1 187 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 FAM86C2PA6NEL3 165 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 TSPAN2O60636 221 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 HEXBP07686 556 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 SYPP08247 313 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 LIMK1P53667 647 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 FOXK2Q01167 660 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 PLCXD2Q0VAA5 305 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC35F1Q5T1Q4 408 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 WBP2NLQ6ICG8 309 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 RTL4Q6ZR62 310 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 USP43Q70EL4 1123 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 GID4Q8IVV7 300 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC43A2Q8N370 569 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 ZNF441Q8N8Z8 693 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 SGTBQ96EQ0 304 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 HSPBAP1Q96EW2 488 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 TNFRSF13CQ96RJ3 184 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 CCNL2Q96S94 520 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 CHCHD6Q9BRQ6 235 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 GTPBP2Q9BX10 602 aaKnown RBP16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 CMC2Q9NRP2 79 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 BAIAP2Q9UQB8 552 aa16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 COL5A1P20908 1838 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-210ENST00000521667 TMEM129A0AVI4 362 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 IDSB3KWA1 339 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 CCR4P51679 360 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 BMXP51813 675 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms