RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CCDC54Q8NEL0 328 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 NLGN4YQ8NFZ3 816 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR4F15Q8NGB8 312 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM163Q8TC26 289 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ST6GAL2Q96JF0 529 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CLCC1Q96S66 551 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ADOQ96SZ5 270 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZBP1Q9H171 429 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 PRSS16Q9NQE7 514 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM14AQ9Y6G1 99 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TEX13CA0A0J9YWL9 993 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CDC14CA4D256 554 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 NPIPA2E9PIF3 369 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 NPIPA3F8WFD2 350 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 GABRA5P31644 462 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ETV5P41161 510 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ETV1P50549 477 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 GLT8D1Q68CQ7 371 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 B3GLCTQ6Y288 498 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 DGLUCYQ7Z3D6 616 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 VRK2Q86Y07 508 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 SPERTQ8NA61 448 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR9A4Q8NGU2 314 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZFAND1Q8TCF1 268 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 GAL3ST3Q96A11 431 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CNN2Q99439 309 aaKnown RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF559Q9BR84 538 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 THAP7Q9BT49 309 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ATG5Q9H1Y0 275 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 ASB6Q9NWX5 421 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 BAIAP2Q9UQB8 552 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 MAB21L2Q9Y586 359 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CABIN1Q9Y6J0 2220 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TRIP12Q14669 1992 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 VSTM2BA6NLU5 285 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 MEN1O00255 615 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 PRAMEF2O60811 474 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 SCGB1D2O95969 90 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CFL1P23528 166 aaKnown RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 AHRP35869 848 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 POU4F3Q15319 338 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 SMAD2Q15796 467 aaKnown RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 C3orf38Q5JPI3 329 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 PIP5KL1Q5T9C9 394 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 IL20RBQ6UXL0 311 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 MCATQ8IVS2 390 aaKnown RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 POGLUT1Q8NBL1 392 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TMEM239Q8WW34 195 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 FCAMRQ8WWV6 532 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 TM9SF4Q92544 642 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 KIAA1143Q96AT1 154 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 CACNG6Q9BXT2 260 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 SLC6A17Q9H1V8 727 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 FBRSQ9HAH7 460 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 VDAC3Q9Y277 283 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 LOC285556D6RIA3 1793 aa10.12□□□□□ -0.79
PCDHGA1-202ENST00000517417 LOC105369274A0A096LPK9 316 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 GABRPO00591 440 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 HSPA12AO43301 675 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 ZNF780AO75290 641 aaPredicted RBP10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 F3P13726 295 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 GTF2F2P13984 249 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 CTBP2P56545 445 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR5M10Q6IEU7 315 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR4N4Q8N0Y3 316 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 DHDHQ9UQ10 334 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 ASB4Q9Y574 426 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 IER3IP1Q9Y5U9 82 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 CACNG2Q9Y698 323 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 L7N2F9 121 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 DPM1O60762 260 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 OPN1LWP04000 364 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 S100A9P06702 114 aaKnown RBP10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 FUT1P19526 365 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 PSMA6P60900 246 aaKnown RBP10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 B4GALNT1Q00973 533 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 E2F1Q01094 437 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 RPE65Q16518 533 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 NKAPLQ5M9Q1 402 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 MMP21Q8N119 569 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR5T2Q8NGG2 359 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 OR2T4Q8NH00 348 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 PNPLA2Q96AD5 504 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 C16orf58Q96GQ5 468 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 TEX10Q9NXF1 929 aaPredicted RBP10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 QPCTLQ9NXS2 382 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 CD207Q9UJ71 328 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 MGAMO43451 1857 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 FABP7O15540 132 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 AKR7A2O43488 359 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 NDUFB2O95178 105 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 HLA-DMAP28067 261 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 SFTPDP35247 375 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 MMP12P39900 470 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 KIR2DL3P43628 341 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 PDX1P52945 283 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 S100A10P60903 97 aa10.11□□□□□ -0.79
PCDHGA1-202ENST00000517417 CHRNEQ04844 493 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms