RNA–Protein interactions for RNA: ENST00000516622.1

RNU6-1247P-201, Transcript of RNA, U6 small nuclear 1247, pseudogene, humanhuman

BASIC

Gene RNU6-1247P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1247P-201ENST00000516622 PSMA2P25787 234 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GABRB3P28472 473 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GRK3P35626 688 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GLRXP35754 106 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 MMP12P39900 470 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 MYCNOSP40205 109 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 MATKP42679 507 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GABRB2P47870 512 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 RFX2P48378 723 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 CCR8P51685 355 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 FOXA3P55318 350 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ARPP19P56211 112 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 POLR2FP61218 127 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 HERVK_113P63132 956 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ERVK-8P63133 956 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ERVK-25P63136 954 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 EIF5AP63241 154 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ACTG2P63267 376 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 HMGCS1Q01581 520 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 CHRNDQ07001 517 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SLC38A11Q08AI6 406 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 NCBP1Q09161 790 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 NIPAL4Q0D2K0 466 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 AP1B1Q10567 949 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 PNRC1Q12796 327 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SKP2Q13309 424 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GGTLC2Q14390 218 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GK2Q14410 553 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 DHCR24Q15392 516 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 MOGQ16653 247 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 DECR1Q16698 335 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 UGP2Q16851 508 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ERCC6LQ2NKX8 1250 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 BSXQ3C1V8 233 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 LGALSLQ3ZCW2 172 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GLYR1Q49A26 553 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ASPRV1Q53RT3 343 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ACSBG2Q5FVE4 666 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 PIGGQ5H8A4 983 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 CFAP157Q5JU67 520 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GPATCH4Q5T3I0 446 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 PRAMEF20Q5VT98 475 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 MYSM1Q5VVJ2 828 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 RAET1LQ5VY80 246 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SIGIRRQ6IA17 410 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ZNF529Q6P280 563 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 DARS2Q6PI48 645 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 RAD9BQ6WBX8 426 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ARHGAP36Q6ZRI8 547 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 TMPRSS11FQ6ZWK6 438 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ZNF438Q7Z4V0 828 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ABHD12BQ7Z5M8 362 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SDCCAG8Q86SQ7 713 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 HOGA1Q86XE5 327 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ERI1Q8IV48 349 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 FAM126BQ8IXS8 530 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 C20orf197Q8N268 126 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 TMTC2Q8N394 836 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 STPG4Q8N801 248 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SCAIQ8N9R8 606 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 DNAAF3Q8N9W5 541 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 BANK1Q8NDB2 785 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GSTCDQ8NEC7 633 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 OR2L3Q8NG85 312 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 OR4A15Q8NGL6 344 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 OR10S1Q8NGN2 331 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 OR6Y1Q8NGX8 325 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 OR1P1Q8NH06 330 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 LHFPL5Q8TAF8 219 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 DEPTORQ8TB45 409 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ZCCHC10Q8TBK6 192 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SMCR8Q8TEV9 937 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 C16orf78Q8WTQ4 265 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 RTN4IP1Q8WWV3 396 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 BSNDQ8WZ55 320 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ALG3Q92685 438 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 RAX2Q96IS3 184 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 TXNDC15Q96J42 360 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 PLEKHA8Q96JA3 519 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 CLMNQ96JQ2 1002 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 LRR1Q96L50 414 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 C4orf45Q96LM5 186 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 Q96M85 177 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 STAC3Q96MF2 364 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 GLT1D1Q96MS3 346 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 WDR92Q96MX6 357 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 AIFM3Q96NN9 605 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 PANX1Q96RD7 426 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 BBS4Q96RK4 519 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SLC22A12Q96S37 553 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 CCL19Q99731 98 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 FOXB1Q99853 325 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 MRPL57Q9BQC6 102 aaKnown RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 NEURL2Q9BR09 285 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 PSMG3Q9BT73 122 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 TMED9Q9BVK6 235 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 KATNAL1Q9BW62 490 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 SFXN3Q9BWM7 321 aa-2.1□□□□□ -2.75
RNU6-1247P-201ENST00000516622 ERVK-6Q9BXR3 956 aa-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms