RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 DSCR3O14972 297 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ASGR2P07307 311 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 GIPP09681 153 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF20P17024 532 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 AKR1C4P17516 323 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ZP3P21754 424 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 SRP9P49458 86 aaKnown RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 CCR9P51686 369 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 KCNJ10P78508 379 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 UBE2NLQ5JXB2 153 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 MEPCEQ7L2J0 689 aaKnown RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 RNF175Q8N4F7 328 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 MRPL43Q8N983 215 aaKnown RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 OR52E2Q8NGJ4 325 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 UBTD2Q8WUN7 234 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 IL17FQ96PD4 163 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 CA14Q9ULX7 337 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 V9GY05 133 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 RREB1Q92766 1687 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZAR1LA6NP61 321 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 LEUTXA8MZ59 168 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF878C9JN71 531 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 AGPAT2O15120 278 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 FADS1O60427 444 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 PRSS23O95084 383 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 DCNP07585 359 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 AHRP35869 848 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 LSSP48449 732 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 TAS2R38P59533 333 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 IFITM2Q01629 132 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 BAMBIQ13145 260 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 DYRK1AQ13627 763 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 RAB11BQ15907 218 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CBARPQ8N350 705 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 TMEM156Q8N614 296 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ACOT11Q8WXI4 607 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 UCN3Q969E3 161 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SLC25A36Q96CQ1 311 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF649Q9BS31 505 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 LIN7BQ9HAP6 207 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 IL21RQ9HBE5 538 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 COL4A1P02462 1669 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ASPDHA6ND91 283 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF860A6NHJ4 632 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 FAM183AA6NL82 134 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 DRGXA6NNA5 263 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 FAM227AF5H4B4 570 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 GPR39O43194 453 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SMAD6O43541 496 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ADRB3P13945 408 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CXCR1P25024 350 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 AOAHP28039 575 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 TSPAN31Q12999 210 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 BEX5Q5H9J7 111 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CRTC1Q6UUV9 634 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SMIM14Q96QK8 99 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 PIGMQ9H3S5 423 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF175Q9Y473 711 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 RBM7Q9Y580 266 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 TMEM14AQ9Y6G1 99 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ELAVL4P26378 380 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ID2Q02363 134 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF542PQ5EBM4 170 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 HENMT1Q5T8I9 393 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CYB561A3Q8NBI2 242 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 OR52N1Q8NH53 320 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SEC22CQ9BRL7 303 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SORBS1Q9BX66 1292 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SLC17A9Q9BYT1 436 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 MVB12BQ9H7P6 319 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 FZD3Q9NPG1 666 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SERINC1Q9NRX5 453 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CENPMQ9NSP4 180 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ACER3Q9NUN7 267 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 MED17Q9NVC6 651 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CIB4A0PJX0 185 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ETV5P41161 510 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 CDONQ4KMG0 1287 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF585AQ6P3V2 769 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 FCRLAQ7L513 359 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 PXKQ7Z7A4 578 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 TMEM41AQ96HV5 264 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 MED18Q9BUE0 208 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 DPH1Q9BZG8 443 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 SLC25A18Q9H1K4 315 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 APOBEC3BQ9UH17 382 aaKnown RBP10.53□□□□□ -0.72
TCOF1-211ENST00000513346 PRSS21Q9Y6M0 314 aa10.53□□□□□ -0.72
TCOF1-211ENST00000513346 GGT3PA6NGU5 568 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 SCDO00767 359 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 DNAJB6O75190 326 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 SNRNP70P08621 437 aaKnown RBP10.52□□□□□ -0.72
TCOF1-211ENST00000513346 IGFBP6P24592 240 aaPredicted RBP10.52□□□□□ -0.72
TCOF1-211ENST00000513346 CASRP41180 1078 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 CAMLGP49069 296 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 DECR1Q16698 335 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms