RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SH3PXD2BA1X283 911 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 CCDC162PA2VCL2 907 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 TRIM64CA6NLI5 447 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 SLC16A5O15375 505 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PLIN3O60664 434 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 TMCC2O75069 709 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 LDB3O75112 727 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 SERPINI2O75830 405 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PDE5AO76074 875 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 APOA4P06727 396 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 VDRP11473 427 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 MLNP12872 115 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 TCF4P15884 667 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PORP16435 677 aaPredicted RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 C21orf33P30042 268 aaPredicted RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 PRDX3P30048 256 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 CEACAM8P31997 349 aaPredicted RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 TTKP33981 857 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 MLF1P58340 268 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 ABCE1P61221 599 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 POLR2LP62875 67 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 DYNLT1P63172 113 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 MYBPC1Q00872 1141 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 OC90Q02509 493 aaPredicted RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 PPIDQ08752 370 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 CBX3Q13185 183 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 FLOT2Q14254 428 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PCLAFQ15004 111 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PDK2Q15119 407 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 CCDC153Q494R4 210 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 KCTD21Q4G0X4 260 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 FASTKD1Q53R41 847 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 FAM166AQ6J272 317 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 FIGLAQ6QHK4 219 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 ABHD13Q7L211 337 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 OOSP2Q86WS3 158 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PGAM4Q8N0Y7 254 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 POGLUT1Q8NBL1 392 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 KCTD6Q8NC69 237 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 CEP70Q8NHQ1 597 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 BORCS5Q969J3 196 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 SMIM14Q96QK8 99 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 NRTNQ99748 197 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 EBNA1BP2Q99848 306 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 EBF4Q9BQW3 602 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 NAT9Q9BTE0 207 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 RIOK2Q9BVS4 552 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 OSBPL11Q9BXB4 747 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 ZYG11BQ9C0D3 744 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 CCDC68Q9H2F9 335 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 C8orf4Q9NR00 106 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 MDFICQ9P1T7 246 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 ZNF629Q9UEG4 869 aaPredicted RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 MARCOQ9UEW3 520 aaPredicted RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 C3orf18Q9UK00 162 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PTBP2Q9UKA9 531 aaKnown RBP4.76□□□□□ -1.65
GYPB-212ENST00000511198 ACSL5Q9ULC5 683 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 LIPGQ9Y5X9 500 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 CEPT1Q9Y6K0 416 aa4.76□□□□□ -1.65
GYPB-212ENST00000511198 PLSCR5A0PG75 271 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 NPIPB15A6NHN6 443 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 H7C0C1 242 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 ZNF195O14628 629 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 BCKDKO14874 412 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 WDR1O75083 606 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 SLC25A12O75746 678 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 BCAS2O75934 225 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 H6PDO95479 791 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 IGKV3-20P01619 116 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 KRT3P12035 628 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 ZNF7P17097 686 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 HMOX2P30519 316 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 PPARGP37231 505 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 CDKN1AP38936 164 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 MAGEA12P43365 314 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 OR1D4P47884 311 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 ATP5OP48047 213 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 CD151P48509 253 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 ZNF136P52737 540 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 ESRRGP62508 458 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 FAM27E3Q08E93 113 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 NIPAL4Q0D2K0 466 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 FRG1Q14331 258 aaKnown RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 ZIC1Q15915 447 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 LRRC36Q1X8D7 754 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 CCDC92Q53HC0 331 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 C2CD6Q53TS8 623 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 PIGGQ5H8A4 983 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 KDELC1Q6UW63 502 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 EPGNQ6UW88 154 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 CARM1Q86X55 608 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 ZNF547Q8IVP9 402 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 TTC39CQ8N584 583 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 PACRGLQ8N7B6 248 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 TSPAN14Q8NG11 270 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 LILRB1Q8NHL6 650 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 ZNF420Q8TAQ5 688 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 RDH11Q8TC12 318 aa4.75□□□□□ -1.65
GYPB-212ENST00000511198 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.75□□□□□ -1.65
GYPB-212ENST00000511198 TFB1MQ8WVM0 346 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms