RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MYO1GB0I1T2 1018 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 KDM4EB2RXH2 506 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 F2RL2O00254 374 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 TP53I11O14683 189 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 LSM1O15116 133 aaKnown RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 PIP5K1CO60331 668 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ICOSLGO75144 302 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 UGT2B11O75310 529 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 SKAP2O75563 359 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 HSPA4LO95757 839 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ATP1B1P05026 303 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ALPLP05186 524 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 FGF4P08620 206 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CT45A8P0DMV1 189 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CT45A9P0DMV2 189 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 NEFHP12036 1026 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MALP21145 153 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 BGNP21810 368 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 DRD5P21918 477 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MPIP34949 423 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 DCTP40126 519 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CASP3P42574 277 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 PPICP45877 212 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 NCBP2P52298 156 aaKnown RBP eCLIP4.12□□□□□ -1.75
NUP54-206ENST00000508465 PRKAG1P54619 331 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ADORA2A-AS1P86434 159 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ZNF763Q0D2J5 394 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GAB1Q13480 694 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 HEPACAMQ14CZ8 416 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 RBMS2Q15434 407 aaKnown RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 CHI3L2Q15782 390 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 NTRK2Q16620 822 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GXYLT1Q4G148 440 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CT45A2Q5DJT8 189 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ZNF628Q5EBL2 1059 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 HHATQ5VTY9 493 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 TMEM107Q6UX40 140 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 TMEM108Q6UXF1 575 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 Q6ZPB1 254 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 TRILQ7L0X0 811 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 OVCH2Q7RTZ1 564 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MAVSQ7Z434 540 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GALNT10Q86SR1 603 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 YRDCQ86U90 279 aaKnown RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 SLC22A16Q86VW1 577 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CCDC71Q8IV32 467 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 GPALPP1Q8IXQ4 340 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CLYBLQ8N0X4 340 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 RIBC1Q8N443 379 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 LIX1Q8N485 282 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MARVELD2Q8N4S9 558 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 SLC15A4Q8N697 577 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 KRTCAP2Q8N6L1 136 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 POGLUT1Q8NBL1 392 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 C7orf57Q8NEG2 295 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 OR7A2PQ8NGA2 310 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 OR6Y1Q8NGX8 325 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 NUBPLQ8TB37 319 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 FAM57AQ8TBR7 257 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 SPPL2AQ8TCT8 520 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MGARPQ8TDB4 240 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 PAQR8Q8TEZ7 354 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 TWIST2Q8WVJ9 160 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ITLN2Q8WWU7 325 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 TRIM63Q969Q1 353 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CTHRC1Q96CG8 243 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ELP4Q96EB1 424 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 OTUB1Q96FW1 271 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 C16orf58Q96GQ5 468 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 RILPQ96NA2 401 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 AMDHD1Q96NU7 426 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 NODALQ96S42 347 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 DOHHQ9BU89 302 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 C1orf50Q9BV19 199 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ANGPTL4Q9BY76 406 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 UCK2Q9BZX2 261 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 C20orf27Q9GZN8 174 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 IL1RL2Q9HB29 575 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 FOLH1BQ9HBA9 442 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 EML4Q9HC35 981 aaKnown RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 MYNNQ9NPC7 610 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 EQTNQ9NQ60 294 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MIEF1Q9NQG6 463 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 PNPLA3Q9NST1 481 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 PNPOQ9NVS9 261 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 FLRT3Q9NZU0 649 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CNIH4Q9P003 139 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 SPRR3Q9UBC9 169 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 GTF2A1LQ9UNN4 478 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 ENTPD4Q9Y227 616 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 MEMO1Q9Y316 297 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 SLC6A5Q9Y345 797 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 CHCHD2Q9Y6H1 151 aaPredicted RBP4.12□□□□□ -1.75
NUP54-206ENST00000508465 PTPN13Q12923 2485 aa4.12□□□□□ -1.75
NUP54-206ENST00000508465 FBN2P35556 2912 aa4.11□□□□□ -1.75
NUP54-206ENST00000508465 PCNX1Q96RV3 2341 aa4.11□□□□□ -1.75
NUP54-206ENST00000508465 TRGV5A0A0B4J1U4 118 aa4.11□□□□□ -1.75
NUP54-206ENST00000508465 PRSS44E7EML9 344 aa4.11□□□□□ -1.75
NUP54-206ENST00000508465 C19orf84I3L1E1 186 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms