RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ZBTB44Q8NCP5 570 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 WDR19Q8NEZ3 1342 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 AGAP11Q8TF27 550 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 ANKRD9Q96BM1 317 aaPredicted RBP4.59□□□□□ -1.67
HERC4-213ENST00000506515 C11orf24Q96F05 449 aaPredicted RBP4.59□□□□□ -1.67
HERC4-213ENST00000506515 ELMO2Q96JJ3 720 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 FICDQ9BVA6 458 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 POLE3Q9NRF9 147 aa4.59□□□□□ -1.67
HERC4-213ENST00000506515 EP300Q09472 2414 aaPredicted RBP4.58□□□□□ -1.68
HERC4-213ENST00000506515 SIPA1L1O43166 1804 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ZBED9Q6R2W3 1325 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 NRCAMQ92823 1304 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 A0A087WWV3 80 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 WASH3PC4AMC7 463 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 CHADO15335 359 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ZNF354AO60765 605 aaPredicted RBP4.58□□□□□ -1.68
HERC4-213ENST00000506515 SMPD2O60906 423 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 PRAMEF12O95522 483 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 AK1P00568 194 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 IDSP22304 550 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 PTGFRP43088 359 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 TRPC1P48995 793 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 RPL34P49207 117 aaKnown RBP4.58□□□□□ -1.68
HERC4-213ENST00000506515 METAP1P53582 386 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 RPS6P62753 249 aaKnown RBP4.58□□□□□ -1.68
HERC4-213ENST00000506515 TFDP1Q14186 410 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 TRIP10Q15642 601 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 UBE2V2Q15819 145 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 MICAQ29983 383 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 WASH2PQ6VEQ5 465 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ZNF600Q6ZNG1 722 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ASCL5Q7RTU5 278 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ERICH1Q86X53 443 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 NAXDQ8IW45 347 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 EFCAB13Q8IY85 973 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 FNDC8Q8TC99 324 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ADIPOR1Q96A54 375 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 C1orf147Q96MC9 270 aaPredicted RBP4.58□□□□□ -1.68
HERC4-213ENST00000506515 VSTM2LQ96N03 204 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 APOL2Q9BQE5 337 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 CHMP2BQ9UQN3 213 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 DCHS1Q96JQ0 3298 aa4.58□□□□□ -1.68
HERC4-213ENST00000506515 ADGRA3Q8IWK6 1321 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 A0A087WZY1 265 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 IGKV6D-41A0A0C4DH26 115 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 EFCAB7A8K855 629 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 HAS3O00219 553 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 PTMAP06454 111 aaKnown RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 IGFBP1P08833 259 aaPredicted RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 ALPIP09923 528 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 TOP1P11387 765 aaKnown RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 DESP17661 470 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 DPP4P27487 766 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 AXLP30530 894 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 ADRA1AP35348 466 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 CYLC1P35663 651 aaPredicted RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 MAGEA9P43362 315 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 ARHGDIBP52566 201 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 DSCR10P59022 87 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 LMO4P61968 165 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 RUNX3Q13761 415 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 GPNMBQ14956 572 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 CDKN3Q16667 212 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 AFTPHQ6ULP2 937 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 BTNL3Q6UXE8 466 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 CCBE1Q6UXH8 406 aaPredicted RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 GCNT2Q8N0V5 402 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 RHOXF1Q8NHV9 184 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 FRAT1Q92837 279 aaPredicted RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 HPDLQ96IR7 371 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 C9orf85Q96MD7 179 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 FOXN4Q96NZ1 517 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 TBCDQ9BTW9 1192 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 COQ10BQ9H8M1 238 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 RPS10P5Q9NQ39 176 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 BARX2Q9UMQ3 279 aaPredicted RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 NTNG1Q9Y2I2 539 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 EXOSC1Q9Y3B2 195 aaKnown RBP4.57□□□□□ -1.68
HERC4-213ENST00000506515 U3KQV3 271 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 RALGAPA2Q2PPJ7 1873 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 PARP14Q460N5 1801 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 MYO15AQ9UKN7 3530 aa4.57□□□□□ -1.68
HERC4-213ENST00000506515 ZNF292O60281 2723 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 ABCB11O95342 1321 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 TRBV7-9A0A0J9YWB2 115 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 ZSCAN5CA6NGD5 496 aaPredicted RBP4.56□□□□□ -1.68
HERC4-213ENST00000506515 WASHC1A8K0Z3 465 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 PPIHO43447 177 aaKnown RBP4.56□□□□□ -1.68
HERC4-213ENST00000506515 PRKAB2O43741 272 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 LCMT2O60294 686 aaKnown RBP4.56□□□□□ -1.68
HERC4-213ENST00000506515 OR4F21O95013 312 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 THRBP10828 461 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 TNNI3P19429 210 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 PTGER3P43115 390 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 NAPAP54920 295 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 ANGPT1Q15389 498 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 C15orf32Q32M92 178 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 DNAJC21Q5F1R6 531 aaKnown RBP4.56□□□□□ -1.68
HERC4-213ENST00000506515 CELF3Q5SZQ8 465 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms