RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MARCH4Q9P2E8 410 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SERGEFQ9UGK8 458 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CLDN16Q9Y5I7 305 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 LOC105369274A0A096LPK9 316 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 LOC102723532A0A0G2JNH3 316 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 HYKKA2RU49 373 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 FAAHO00519 579 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TTRP02766 147 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SNU13P55769 128 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ILKQ13418 452 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PTGES3Q15185 160 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 FAM110CQ1W6H9 321 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 FAM171BQ6P995 826 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 VITQ6UXI7 678 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 GSG1LQ6UXU4 331 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MRPL21Q7Z2W9 205 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 MRPL52Q86TS9 123 aaKnown RBP5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ACOT1Q86TX2 421 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 UNC93AQ86WB7 457 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 OR4N4Q8N0Y3 316 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ZBTB2Q8N680 514 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 METTL13Q8N6R0 699 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF676Q8N7Q3 588 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM186Q96B77 213 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 RNF157Q96PX1 679 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PKMYT1Q99640 499 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 PLEKHA1Q9HB21 404 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CISHQ9NSE2 258 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 CNIH4Q9P003 139 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 SLC17A6Q9P2U8 582 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 GNG13Q9P2W3 67 aa5.87□□□□□ -1.47
CLCN3-204ENST00000504131 TECPR2O15040 1411 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 UBE2CO00762 179 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 DUX1O43812 170 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 OAS1P00973 400 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 MBPP02686 304 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 NR2F1P10589 423 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 VEGFAP15692 232 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLC6A2P23975 617 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 CD80P33681 288 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLBPQ14493 270 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PTPRCAPQ14761 206 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLC39A4Q6P5W5 647 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLC47A2Q86VL8 602 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ADGRF3Q8IZF5 1079 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PACRGLQ8N7B6 248 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 OR56B1Q8NGI3 324 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SETD7Q8WTS6 366 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 FCRL3Q96P31 734 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 DUX5Q96PT3 197 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PURBQ96QR8 312 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF426Q9BUY5 554 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 LACRTQ9GZZ8 138 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ACSS3Q9H6R3 686 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 NANOGQ9H9S0 305 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 A0A1W2PQC6 194 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PLPP1O14494 284 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 TSPAN12O95859 305 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 MELTFP08582 738 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 CD44P16070 742 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 HTR2CP28335 458 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 GGT2P36268 569 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ARL2P36404 184 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ECI1P42126 302 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 OR3A2P47893 321 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLC6A11P48066 632 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PLK1P53350 603 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ID2Q02363 134 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 RBMS2Q15434 407 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 GCSAMLQ5JQS6 135 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 FFAR4Q5NUL3 377 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 CATSPEREQ5SY80 951 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 RTL6Q6ICC9 239 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 C17orf99Q6UX52 265 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLC16A9Q7RTY1 509 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 RTN4RL1Q86UN2 441 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PARP16Q8N5Y8 322 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 FAM181AQ8N9Y4 354 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 GPRC5AQ8NFJ5 357 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 UBE2FQ969M7 185 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 EBF4Q9BQW3 602 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 CPVLQ9H3G5 476 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 DMRT3Q9NQL9 472 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SIDT1Q9NXL6 827 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SLCO1C1Q9NYB5 712 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ING1Q9UK53 422 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 PCDHB14Q9Y5E9 798 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 KLRG2A4D1S0 409 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 RFXANKO14593 260 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 RAMP3O60896 148 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 SOX14O95416 240 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 APOA2P02652 100 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 ALDOAP04075 364 aaKnown RBP5.86□□□□□ -1.47
CLCN3-204ENST00000504131 CYBBP04839 570 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 CHATP28329 748 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 AQP2P41181 271 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 GIPRP48546 466 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 HES1Q14469 280 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 TEX44Q53QW1 395 aa5.86□□□□□ -1.47
CLCN3-204ENST00000504131 TTC32Q5I0X7 151 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms