RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 POU2F1P14859 743 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 CCKARP32238 428 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 KCNJ5P48544 419 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 MVDP53602 400 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 AQP5P55064 265 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 SESN3P58005 492 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 STX1BP61266 288 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 KCNJ10P78508 379 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 PLAURQ03405 335 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 C6orf10Q5SRN2 563 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 C3orf33Q6P1S2 294 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 LRRC74BQ6ZQY2 392 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 ZNF610Q8N9Z0 462 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 OR6K3Q8NGY3 331 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 RNF128Q8TEB7 428 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 ROBO4Q8WZ75 1007 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 CPNE4Q96A23 557 aaPredicted RBP16.45■□□□□ 0.22
HOXD11-202ENST00000498438 AURKBQ96GD4 344 aaPredicted RBP16.45■□□□□ 0.22
HOXD11-202ENST00000498438 TIGARQ9NQ88 270 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 GLRX2Q9NS18 164 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
HOXD11-202ENST00000498438 F8P00451 2351 aa16.45■□□□□ 0.22
HOXD11-202ENST00000498438 TEP1Q99973 2627 aaKnown RBP16.44■□□□□ 0.22
HOXD11-202ENST00000498438 SASH3O75995 380 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 NR2F1P10589 423 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 SLC7A1P30825 629 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 DNAJA1P31689 397 aaKnown RBP16.44■□□□□ 0.22
HOXD11-202ENST00000498438 RYKP34925 604 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 MRPL19P49406 292 aaKnown RBP16.44■□□□□ 0.22
HOXD11-202ENST00000498438 PCYT1AP49585 367 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 MERTKQ12866 999 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 FBXW10Q5XX13 1052 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 CDC20BQ86Y33 519 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 ABHD3Q8WU67 409 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 TMEM234Q8WY98 164 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 REXO5Q96IC2 774 aaKnown RBP16.44■□□□□ 0.22
HOXD11-202ENST00000498438 SLC39A3Q9BRY0 314 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 CCDC28BQ9BUN5 200 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 EXOSC3Q9NQT5 275 aaKnown RBP16.44■□□□□ 0.22
HOXD11-202ENST00000498438 ACER3Q9NUN7 267 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 ELOVL5Q9NYP7 299 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 P2RX2Q9UBL9 471 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 TESMINQ9Y4I5 508 aa16.44■□□□□ 0.22
HOXD11-202ENST00000498438 A0A1W2PNR3 127 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 AGAP5A6NIR3 686 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 PABPC4LP0CB38 370 aaKnown RBP16.43■□□□□ 0.22
HOXD11-202ENST00000498438 ETFAP13804 333 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 RPS4Y1P22090 263 aaKnown RBP16.43■□□□□ 0.22
HOXD11-202ENST00000498438 AGTR1P30556 359 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 UGT2B10P36537 528 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 CRATP43155 626 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 MAGEA8P43361 318 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 MAPK11Q15759 364 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 EXOC3L2Q2M3D2 409 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 SLC2A7Q6PXP3 512 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 PLEKHM3Q6ZWE6 761 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 FCRLAQ7L513 359 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 ARFGAP2Q8N6H7 521 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 ZNF563Q8TA94 476 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 WDR60Q8WVS4 1066 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 CKAP2Q8WWK9 683 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 CNOT9Q92600 299 aaKnown RBP16.43■□□□□ 0.22
HOXD11-202ENST00000498438 GTF2H4Q92759 462 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 LIME1Q9H400 295 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 PLSCR4Q9NRQ2 329 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 NDRG3Q9UGV2 375 aa16.43■□□□□ 0.22
HOXD11-202ENST00000498438 ADAM11O75078 769 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 GOSR1O95249 250 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 DSTNP60981 165 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 RNPS1Q15287 305 aaKnown RBP16.42■□□□□ 0.22
HOXD11-202ENST00000498438 GTF2IRD2BQ6EKJ0 949 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 GTF2IRD2Q86UP8 949 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 CMIPQ8IY22 773 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 MAGEB18Q96M61 343 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 OR5B2Q96R09 309 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 PAIP1Q9H074 479 aaKnown RBP16.42■□□□□ 0.22
HOXD11-202ENST00000498438 MTHFD2LQ9H903 347 aaPredicted RBP16.42■□□□□ 0.22
HOXD11-202ENST00000498438 SERINC1Q9NRX5 453 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 KLHL28Q9NXS3 571 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 PCDHB14Q9Y5E9 798 aa16.42■□□□□ 0.22
HOXD11-202ENST00000498438 IGHV3-15A0A0B4J1V0 119 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 C16orf97H3BN30 126 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 NR5A2O00482 541 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 HRGP04196 525 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 BCHEP06276 602 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 RAC3P60763 192 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 POU4F3Q15319 338 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 TESK1Q15569 626 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 MRPL2Q5T653 305 aaKnown RBP16.41■□□□□ 0.22
HOXD11-202ENST00000498438 FUNDC1Q8IVP5 155 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 WFIKKN1Q96NZ8 548 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 MED18Q9BUE0 208 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 CCDC106Q9BWC9 280 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 KLHL4Q9C0H6 718 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 C12orf49Q9H741 205 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 CTPS2Q9NRF8 586 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 CCDC167Q9P0B6 97 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 KLHL13Q9P2N7 655 aa16.41■□□□□ 0.22
HOXD11-202ENST00000498438 FREM1Q5H8C1 2179 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms