RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 VCANP13611 3396 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 GFYI3L273 518 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 TSPAN6O43657 245 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 B4GALT2O60909 372 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 KLHL18O94889 574 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 NFATC1O95644 943 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 CLUP10909 449 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 EPXP11678 715 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 CENPAP49450 140 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ENTPD8Q5MY95 495 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SLC25A30Q5SVS4 291 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 TMEM69Q5SWH9 247 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF546Q86UE3 836 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 ZNF614Q8N883 585 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 CHST14Q8NCH0 376 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 DUSP19Q8WTR2 217 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SMPDL3AQ92484 453 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 CXorf40BQ96DE9 158 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SPSB2Q99619 263 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PBX4Q9BYU1 374 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 SEMA4GQ9NTN9 838 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 DHCR7Q9UBM7 475 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
GAPVD1-220ENST00000497580 PATJQ8NI35 1801 aa12.15□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2M5A3KFT3 312 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 CDHR4A6H8M9 788 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 PDHA2P29803 388 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 CSF2RBP32927 897 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 C21orf58P58505 322 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 RBM39Q14498 530 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 NDUFAF6Q330K2 333 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 NAXDQ8IW45 347 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ZSCAN1Q8NBB4 408 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 LINC01599Q8WXQ3 324 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 SMPDL3BQ92485 455 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 SYNPO2LQ9H987 977 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 PRAMEF27A3QJZ7 478 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 PSMD9O00233 223 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 KPNA3O00505 521 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 UGDHO60701 494 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 EFNB1P98172 346 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 TSPAN31Q12999 210 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 MRPL58Q14197 206 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 C9orf152Q5JTZ5 239 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF626Q68DY1 528 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 TSSK4Q6SA08 328 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM71CQ8NEG0 241 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2T33Q8NG76 320 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 OR6S1Q8NH40 331 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 BRIX1Q8TDN6 353 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 RXFP4Q8TDU9 374 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 FGF11Q92914 225 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ZDHHC6Q9H6R6 413 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 POM121BA6NF01 834 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ANKRD61A6NGH8 418 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 CNR1P21554 472 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ITGB8P26012 769 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 AKR1C3P42330 323 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 AP1S1P61966 158 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 KIAA1211LQ6NV74 962 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 SLCO4C1Q6ZQN7 724 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 LRRC56Q8IYG6 542 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 OSTF1Q92882 214 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 OTUB2Q96DC9 234 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 NEURL3Q96EH8 262 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 GAS2L1Q99501 681 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF649Q9BS31 505 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 MBD2Q9UBB5 411 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 NOSIPQ9Y314 301 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 PLXNA4Q9HCM2 1894 aa12.14□□□□□ -0.47
GAPVD1-220ENST00000497580 A0A0U1RQF3 1178 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ACOD1A6NK06 481 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 SC5DO75845 299 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 LIPCP11150 499 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PTAFRP25105 342 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 CAPZA1P52907 286 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 FZD5Q13467 585 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ADGRF1Q5T601 910 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 C5orf46Q6UWT4 87 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 VRK2Q86Y07 508 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 TRIM43Q96BQ3 446 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ZG16BQ96DA0 208 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 IL17FQ96PD4 163 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 F2RL3Q96RI0 385 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 WDR77Q9BQA1 342 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 MYNNQ9NPC7 610 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 AKAP7Q9P0M2 348 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms