RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ETV2O00321 342 aaPredicted RBP29.68■■■□□ 2.34
CBX4-203ENST00000494546 DNAJA2O60884 412 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 CHRM4P08173 479 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 PABPC4LP0CB38 370 aaKnown RBP29.68■■■□□ 2.34
CBX4-203ENST00000494546 RYKP34925 604 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 IST1P53990 364 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 KCNJ10P78508 379 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 TESK1Q15569 626 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 AP1ARQ63HQ0 302 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 FAM71CQ8NEG0 241 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 VPS33AQ96AX1 596 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 WFIKKN1Q96NZ8 548 aa29.68■■■□□ 2.34
CBX4-203ENST00000494546 A0A1W2PNR3 127 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 CLDN24A6NM45 220 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 C16orf97H3BN30 126 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 POLR3GO15318 223 aaPredicted RBP29.67■■■□□ 2.34
CBX4-203ENST00000494546 GOSR1O95249 250 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 NR2F1P10589 423 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 CCKARP32238 428 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 ART1P52961 327 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 MERTKQ12866 999 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 ZNF563Q8TA94 476 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 RNF128Q8TEB7 428 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 ABHD3Q8WU67 409 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 ITCHQ96J02 903 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 MED18Q9BUE0 208 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 KLHL4Q9C0H6 718 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 SLC38A1Q9H2H9 487 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 TCF7L2Q9NQB0 619 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 ST6GALNAC2Q9UJ37 374 aa29.67■■■□□ 2.34
CBX4-203ENST00000494546 HEATR5AQ86XA9 2040 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 C6orf10Q5SRN2 563 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 C3orf33Q6P1S2 294 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 LRRC74BQ6ZQY2 392 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 MSANTD1Q6ZTZ1 278 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 C12orf49Q9H741 205 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 SERINC1Q9NRX5 453 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 ACER3Q9NUN7 267 aa29.66■■■□□ 2.34
CBX4-203ENST00000494546 FAM234BA2RU67 622 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 HMGB1P1B2RPK0 211 aaPredicted RBP29.65■■■□□ 2.34
CBX4-203ENST00000494546 TGDSO95455 350 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 HRGP04196 525 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 AGTR1P30556 359 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 IDH3AP50213 366 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 STX1BP61266 288 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 GTDC1Q4AE62 458 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 FCRLAQ7L513 359 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 ZNF550Q7Z398 422 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 ARFGAP2Q8N6H7 521 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 OR5B2Q96R09 309 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 EBF4Q9BQW3 602 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 CCM2LQ9NUG4 571 aaPredicted RBP29.65■■■□□ 2.34
CBX4-203ENST00000494546 INTS9Q9NV88 658 aaKnown RBP29.65■■■□□ 2.34
CBX4-203ENST00000494546 EDARQ9UNE0 448 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 PLEKHA6Q9Y2H5 1048 aa29.65■■■□□ 2.34
CBX4-203ENST00000494546 ZCCHC18P0CG32 403 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 NID1P14543 1247 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 CRATP43155 626 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 RNPS1Q15287 305 aaKnown RBP29.64■■■□□ 2.34
CBX4-203ENST00000494546 PLEKHM3Q6ZWE6 761 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 CNOT9Q92600 299 aaKnown RBP29.64■■■□□ 2.34
CBX4-203ENST00000494546 NINJ1Q92982 152 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 MTHFD2LQ9H903 347 aaPredicted RBP29.64■■■□□ 2.34
CBX4-203ENST00000494546 VIPAS39Q9H9C1 493 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 TPT1P8Q9HAU6 139 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 ZNF226Q9NYT6 803 aa29.64■■■□□ 2.34
CBX4-203ENST00000494546 IGHV3-15A0A0B4J1V0 119 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 AGAP5A6NIR3 686 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 ETFAP13804 333 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 H2AFXP16104 143 aaPredicted RBP29.63■■■□□ 2.33
CBX4-203ENST00000494546 MVDP53602 400 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 PPP2R2AP63151 447 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 TMEM201Q5SNT2 666 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 ANKRD34AQ69YU3 496 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 STK32CQ86UX6 486 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 AURKBQ96GD4 344 aaPredicted RBP29.63■■■□□ 2.33
CBX4-203ENST00000494546 ZC3HAV1LQ96H79 300 aaKnown RBP29.63■■■□□ 2.33
CBX4-203ENST00000494546 EXOSC3Q9NQT5 275 aaKnown RBP29.63■■■□□ 2.33
CBX4-203ENST00000494546 C6orf203Q9P0P8 240 aaPredicted RBP29.63■■■□□ 2.33
CBX4-203ENST00000494546 P2RX2Q9UBL9 471 aa29.63■■■□□ 2.33
CBX4-203ENST00000494546 PRKD3O94806 890 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 ENPP1P22413 925 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 DNASE1P24855 282 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 AQP5P55064 265 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 RAC3P60763 192 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 PLAURQ03405 335 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 TUSC5Q8IXB3 177 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 WDR60Q8WVS4 1066 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 KLHL13Q9P2N7 655 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 AKAP9Q99996 3911 aa29.62■■■□□ 2.33
CBX4-203ENST00000494546 IL7RP16871 459 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 MAGEA8P43361 318 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 GNA13Q14344 377 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 SLC2A7Q6PXP3 512 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 SPNS3Q6ZMD2 512 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 CMIPQ8IY22 773 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 CCDC28BQ9BUN5 200 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 PLEKHF2Q9H8W4 249 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 CTPS2Q9NRF8 586 aa29.61■■■□□ 2.33
CBX4-203ENST00000494546 ADAM11O75078 769 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms