RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 SELENBP1Q13228 472 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 GNA13Q14344 377 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 RGNQ15493 299 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 MAPK11Q15759 364 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 PAGE3Q5JUK9 113 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 PEX5LQ8IYB4 626 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 FAM71CQ8NEG0 241 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 ST8SIA1Q92185 356 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 REXO5Q96IC2 774 aaKnown RBP19.62■□□□□ 0.73
HPS3-207ENST00000494327 SRXN1Q9BYN0 137 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 RABEP2Q9H5N1 569 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 SERINC1Q9NRX5 453 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 ACER3Q9NUN7 267 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 SLAMF8Q9P0V8 285 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 TRIM33Q9UPN9 1127 aa19.62■□□□□ 0.73
HPS3-207ENST00000494327 A0A1W2PNR3 127 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 DBIP07108 87 aaKnown RBP19.61■□□□□ 0.73
HPS3-207ENST00000494327 NUDT7P0C024 238 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 CTBP2P56545 445 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 IRX1P78414 480 aaPredicted RBP19.61■□□□□ 0.73
HPS3-207ENST00000494327 SF3A3Q12874 501 aaKnown RBP eCLIP19.61■□□□□ 0.73
HPS3-207ENST00000494327 RPS26P11Q5JNZ5 115 aaPredicted RBP19.61■□□□□ 0.73
HPS3-207ENST00000494327 PLEKHM3Q6ZWE6 761 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 FAM214BQ7L5A3 538 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 CMIPQ8IY22 773 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 ZNF610Q8N9Z0 462 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 FAM222BQ8WU58 562 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 SLC38A5Q8WUX1 472 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 TMEM19Q96HH6 336 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 GMPPAQ96IJ6 420 aaPredicted RBP19.61■□□□□ 0.73
HPS3-207ENST00000494327 OR5B2Q96R09 309 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 RAD21L1Q9H4I0 556 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 SLC52A3Q9NQ40 469 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 THUMPD1Q9NXG2 353 aaKnown RBP19.61■□□□□ 0.73
HPS3-207ENST00000494327 SLC25A37Q9NYZ2 338 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 CALML5Q9NZT1 146 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 PROCRQ9UNN8 238 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 EMC9Q9Y3B6 208 aa19.61■□□□□ 0.73
HPS3-207ENST00000494327 FBN2P35556 2912 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 ETV2O00321 342 aaPredicted RBP19.6■□□□□ 0.73
HPS3-207ENST00000494327 KCNJ5P48544 419 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 IDH2P48735 452 aaKnown RBP19.6■□□□□ 0.73
HPS3-207ENST00000494327 SORDQ00796 357 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 PLAURQ03405 335 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 FAM27E3Q08E93 113 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 ZNF239Q16600 458 aaKnown RBP19.6■□□□□ 0.73
HPS3-207ENST00000494327 LRIF1Q5T3J3 769 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 GTF2IRD2BQ6EKJ0 949 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 C3orf33Q6P1S2 294 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 GTF2IRD2Q86UP8 949 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 VRK2Q86Y07 508 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 OR52P1PQ8NH57 321 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 PMM1Q92871 262 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 CPNE4Q96A23 557 aaPredicted RBP19.6■□□□□ 0.73
HPS3-207ENST00000494327 SIKE1Q9BRV8 207 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 COQ10BQ9H8M1 238 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 EXOSC3Q9NQT5 275 aaKnown RBP19.6■□□□□ 0.73
HPS3-207ENST00000494327 TMEM45AQ9NWC5 275 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 DNAJB12Q9NXW2 375 aaKnown RBP19.6■□□□□ 0.73
HPS3-207ENST00000494327 MED12LQ86YW9 2145 aa19.6■□□□□ 0.73
HPS3-207ENST00000494327 AP3D1O14617 1153 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 ADAM11O75078 769 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 CGAP01215 116 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 TFPIP10646 304 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 NID1P14543 1247 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 HOXB9P17482 250 aaPredicted RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 RPS4Y1P22090 263 aaKnown RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 GUSBP1Q15486 140 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 MRPL2Q5T653 305 aaKnown RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 ZNF474Q6S9Z5 364 aaPredicted RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 MSRB3Q8IXL7 192 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 STON2Q8WXE9 905 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 MAL2Q969L2 176 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 GPATCH1Q9BRR8 931 aaKnown RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 CACYBPQ9HB71 228 aaKnown RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 CTPS2Q9NRF8 586 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 RLIMQ9NVW2 624 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 VAPAQ9P0L0 249 aa19.59■□□□□ 0.73
HPS3-207ENST00000494327 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.59■□□□□ 0.73
HPS3-207ENST00000494327 TEX15Q9BXT5 2789 aa19.58■□□□□ 0.73
HPS3-207ENST00000494327 IGHV3-15A0A0B4J1V0 119 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 A0A1W2PP18 115 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 SS18L1O75177 396 aaPredicted RBP19.58■□□□□ 0.72
HPS3-207ENST00000494327 VIMP08670 466 aaKnown RBP19.58■□□□□ 0.72
HPS3-207ENST00000494327 CD8BP10966 210 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 EPXP11678 715 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 CCNA2P20248 432 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 APOBEC1P41238 236 aaKnown RBP19.58■□□□□ 0.72
HPS3-207ENST00000494327 FADDQ13158 208 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 EXOC3L2Q2M3D2 409 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 LIN52Q52LA3 116 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 ZNF836Q6ZNA1 936 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 ABHD3Q8WU67 409 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 DNAJA3Q96EY1 480 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 SLC39A3Q9BRY0 314 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 TMEM120AQ9BXJ8 343 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 GLRX2Q9NS18 164 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 FGFR1OP2Q9NVK5 253 aa19.58■□□□□ 0.72
HPS3-207ENST00000494327 DSPPQ9NZW4 1301 aa19.57■□□□□ 0.72
HPS3-207ENST00000494327 A0A0G2JPF8 293 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms