RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FAM71CQ8NEG0 241 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 MAL2Q969L2 176 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 TMEM19Q96HH6 336 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-224ENST00000494132 SLC25A37Q9NYZ2 338 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 P2RX2Q9UBL9 471 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 FOXD3Q9UJU5 478 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-224ENST00000494132 ITGB1BP2Q9UKP3 347 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 LIPT1Q9Y234 373 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 SLC35A3Q9Y2D2 325 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
ATG4B-224ENST00000494132 PDZD2O15018 2839 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 A0A096LPI6 279 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 AGAP5A6NIR3 686 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 CRHP06850 196 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 GUSBP08236 651 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 IL7RP16871 459 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-224ENST00000494132 CCNA2P20248 432 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 SLC7A1P30825 629 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 MRPL19P49406 292 aaKnown RBP13.15□□□□□ -0.3
ATG4B-224ENST00000494132 SQLEQ14534 574 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 ZNF239Q16600 458 aaKnown RBP13.15□□□□□ -0.3
ATG4B-224ENST00000494132 EXOC3L2Q2M3D2 409 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 SLC25A53Q5H9E4 307 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 PDSS1Q5T2R2 415 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 MRPL2Q5T653 305 aaKnown RBP13.15□□□□□ -0.3
ATG4B-224ENST00000494132 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 KIF18BQ86Y91 864 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 C10orf111Q8N326 155 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 ZNF610Q8N9Z0 462 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 ABHD3Q8WU67 409 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 SLC38A5Q8WUX1 472 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 OR5B2Q96R09 309 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 C12orf49Q9H741 205 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 SLC52A3Q9NQ40 469 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 RLIMQ9NVW2 624 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 DNAJB12Q9NXW2 375 aaKnown RBP13.15□□□□□ -0.3
ATG4B-224ENST00000494132 PROCRQ9UNN8 238 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 LRBAP50851 2863 aa13.15□□□□□ -0.3
ATG4B-224ENST00000494132 GJE1A6NN92 205 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 CLIC1O00299 241 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 MSTNO14793 375 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 DNAJA2O60884 412 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 CGAP01215 116 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 TFPTP0C1Z6 253 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 GKN3PP0CG01 181 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 RPS4Y1P22090 263 aaKnown RBP13.14□□□□□ -0.31
ATG4B-224ENST00000494132 ENPP1P22413 925 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 KCNJ5P48544 419 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 IDH2P48735 452 aaKnown RBP13.14□□□□□ -0.31
ATG4B-224ENST00000494132 CTBP2P56545 445 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 POU4F3Q15319 338 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 GUSBP1Q15486 140 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 RGNQ15493 299 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 C3orf33Q6P1S2 294 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 FAM214BQ7L5A3 538 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 LURAP1LQ8IV03 231 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 ARFGAP2Q8N6H7 521 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 OR52P1PQ8NH57 321 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 ST8SIA1Q92185 356 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 IKZF5Q9H5V7 419 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 MTHFD2LQ9H903 347 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-224ENST00000494132 CTPS2Q9NRF8 586 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 PAQR5Q9NXK6 330 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-224ENST00000494132 VAPAQ9P0L0 249 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 CCDC168Q8NDH2 2452 aa13.14□□□□□ -0.31
ATG4B-224ENST00000494132 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 SS18L1O75177 396 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 CTAG2O75638 210 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 TFPIP10646 304 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 POU2F1P14859 743 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 ATP4BP51164 291 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 CRISP3P54108 245 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 TXNL4AP83876 142 aaKnown RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 SORDQ00796 357 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 GUCY1A3Q02108 690 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 LRIF1Q5T3J3 769 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 AP1ARQ63HQ0 302 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 FCRLAQ7L513 359 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 PEX5LQ8IYB4 626 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 REXO5Q96IC2 774 aaKnown RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 TMEM120AQ9BXJ8 343 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 ZNF385DQ9H6B1 395 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 ACER3Q9NUN7 267 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-224ENST00000494132 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 DSPPQ9NZW4 1301 aa13.13□□□□□ -0.31
ATG4B-224ENST00000494132 A6NNC1 897 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 EPXP11678 715 aa13.12□□□□□ -0.31
ATG4B-224ENST00000494132 NID1P14543 1247 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms