RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PCSK2P16519 638 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 EFNA1P20827 205 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CERS1P27544 350 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 PTGER1P34995 402 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 GSK3BP49841 420 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 DGKQP52824 942 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 PER3P56645 1201 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 OC90Q02509 493 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CDK5R2Q13319 367 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 DOC2AQ14183 400 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 TBCEQ15813 527 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 GRK1Q15835 563 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 IGSF11Q5DX21 431 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 TMEM198Q66K66 360 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 BICRALQ6AI39 1079 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 SLC25A25Q6KCM7 469 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 C3P1Q6ZMU1 363 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 C16orf62Q7Z3J2 963 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 MDGA2Q7Z553 956 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 NRARPQ7Z6K4 114 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CMC1Q7Z7K0 106 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 RNF130Q86XS8 419 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 CCNYL1Q8N7R7 359 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 OR8H1Q8NGG4 311 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 OR52E4Q8NGH9 312 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 DOK4Q8TEW6 326 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ASB15Q8WXK1 588 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 TMBIM1Q969X1 311 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 LRRC58Q96CX6 371 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 SGTBQ96EQ0 304 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ARL5BQ96KC2 179 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 F2RL3Q96RI0 385 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 BBS4Q96RK4 519 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 MBOAT4Q96T53 435 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 AIF1LQ9BQI0 150 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 UTP23Q9BRU9 249 aaKnown RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 SORBS1Q9BX66 1292 aaKnown RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 DERL2Q9GZP9 239 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 GABARAPL1Q9H0R8 117 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 MAGIXQ9H6Y5 334 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 DEPPQ9NTK1 212 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 LRFN1Q9P244 771 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 KIF25Q9UIL4 384 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ACAD8Q9UKU7 415 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 BAIAP2Q9UQB8 552 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ENTPD4Q9Y227 616 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 PCDHA9Q9Y5H5 950 aa7.52□□□□□ -1.21
HDAC6-234ENST00000493923 TNPO3Q9Y5L0 923 aaKnown RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 MAP1AP78559 2803 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-234ENST00000493923 ANKRD17O75179 2603 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 A0A0B4J203 849 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TRBV11-1A0A0K0K1C0 115 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 A0A1B0GW55 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 LRIT2A6NDA9 550 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 WASHC1A8K0Z3 465 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 CYR61O00622 381 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ABCD4O14678 606 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 SEC14L5O43304 696 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ERI3O43414 337 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 NME2P1O60361 137 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 HCN1O60741 890 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 FAM20BO75063 409 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 SLC25A12O75746 678 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 APOL3O95236 402 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 CRYABP02511 175 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TPOP07202 933 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4L2P0CJ85 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4L3P0CJ86 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4L4P0CJ87 422 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4L5P0CJ88 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4L6P0CJ89 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DUX4L7P0CJ90 424 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ADORA3P0DMS8 318 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 RRASP10301 218 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 DDCP20711 480 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 NME2P22392 152 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 SLC6A2P23975 617 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 PTBP1P26599 531 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TGFBR2P37173 567 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 KIR3DL1P43629 444 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 NAGLUP54802 743 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 IRF9Q00978 393 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 IL5RAQ01344 420 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ALDH6A1Q02252 535 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ID2Q02363 134 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ZNF267Q14586 743 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 MAPKAPK3Q16644 382 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ZIK1Q3SY52 487 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 Q5BKY6 102 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 XKR6Q5GH73 641 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 OTUD3Q5T2D3 398 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 GLYATQ6IB77 296 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ABHD17CQ6PCB6 329 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 FIP1L1Q6UN15 594 aaKnown RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 PLET1Q6UQ28 207 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 TMIGD1Q6UXZ0 262 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 GDPGP1Q6ZNW5 385 aa7.51□□□□□ -1.21
HDAC6-234ENST00000493923 Q6ZPB1 254 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-234ENST00000493923 ABHD13Q7L211 337 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms