RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ZNF559Q9BR84 538 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 RBM24Q9BX46 236 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 TRIM8Q9BZR9 551 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 QRSL1Q9H0R6 528 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SLC38A1Q9H2H9 487 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 TMEM185BQ9H7F4 350 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 RNF122Q9H9V4 155 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SLC52A3Q9NQ40 469 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 EXOSC3Q9NQT5 275 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 GLRX2Q9NS18 164 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ACER3Q9NUN7 267 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 JKAMPQ9P055 326 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 KCNN3Q9UGI6 736 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 LEF1Q9UJU2 399 aaPredicted RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 PACSIN3Q9UKS6 424 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 CORO2BQ9UQ03 480 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 IFT52Q9Y366 437 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 PKDREJQ9NTG1 2253 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CENPVL1A0A0U1RR11 272 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 TUBAL3A6NHL2 446 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CLDN24A6NM45 220 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 A8MXE2 369 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 ETV2O00321 342 aaPredicted RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 MSTNO14793 375 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 ANGPT2O15123 496 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 EFNA2O43921 213 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 TNFSF13O75888 250 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SMNDC1O75940 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 AQP8O94778 261 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 NTN1O95631 604 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 BCHEP06276 602 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 TFPIP10646 304 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 PRF1P14222 555 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 NID1P14543 1247 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CAPN3P20807 821 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SLC7A1P30825 629 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 KIR2DL2P43627 348 aaPredicted RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 HTR3AP46098 478 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CPA2P48052 419 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 IDH2P48735 452 aaKnown RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 DLX5P56178 289 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CTBP2P56545 445 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SESN3P58005 492 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SIRPAP78324 504 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 GUCY1A3Q02108 690 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 TLE4Q04727 773 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 MERTKQ12866 999 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SELENBP1Q13228 472 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CTU2Q2VPK5 515 aaKnown RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 LIN52Q52LA3 116 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 PAGE3Q5JUK9 113 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 PRAMEF8Q5VWM4 474 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 PRAMEF7Q5VXH5 474 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 C3orf33Q6P1S2 294 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 PLEKHM3Q6ZWE6 761 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 FAM214BQ7L5A3 538 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 HMGN2P46Q86SG4 172 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 FAM71CQ8NEG0 241 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 OR52P1PQ8NH57 321 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CNOT9Q92600 299 aaKnown RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CPNE4Q96A23 557 aaPredicted RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 STARD4Q96DR4 205 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 TMEM19Q96HH6 336 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 GMPPAQ96IJ6 420 aaPredicted RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 ADGRG7Q96K78 797 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SLC39A3Q9BRY0 314 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 TMEM120AQ9BXJ8 343 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 MCCC2Q9HCC0 563 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 A4GALTQ9NPC4 353 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 FANCFQ9NPI8 374 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 FGFR1OP2Q9NVK5 253 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 ELOVL5Q9NYP7 299 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SLAMF8Q9P0V8 285 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 PROCRQ9UNN8 238 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 EMC9Q9Y3B6 208 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 SPIN1Q9Y657 262 aaPredicted RBP6.26□□□□□ -1.41
TOP3A-207ENST00000493648 GMEB1Q9Y692 573 aa6.26□□□□□ -1.41
TOP3A-207ENST00000493648 CDHR4A6H8M9 788 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CFAP73A6NFT4 308 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SULT2B1O00204 365 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 FAAHO00519 579 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CASKO14936 926 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 BCAS1O75363 584 aaPredicted RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 PRKD3O94806 890 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 PGM3O95394 542 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 THBS1P07996 1170 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CD8BP10966 210 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 BMP2P12643 396 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 ETS2P15036 469 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 HOXB9P17482 250 aaPredicted RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 GPX2P18283 190 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 RPS4Y1P22090 263 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SLC6A2P23975 617 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 SHC1P29353 583 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 MDH1P40925 334 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 KCNJ5P48544 419 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 PCYT1AP49585 367 aa6.25□□□□□ -1.41
TOP3A-207ENST00000493648 CLK1P49759 484 aaKnown RBP6.25□□□□□ -1.41
TOP3A-207ENST00000493648 MAP2K6P52564 334 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms