RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NLE1Q9NVX2 485 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 NFKBIL1Q9UBC1 381 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 SH3BGRL2Q9UJC5 107 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 POMT2Q9UKY4 750 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 DSCAMO60469 2012 aa2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ANKRD17O75179 2603 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 TEP1Q99973 2627 aaKnown RBP2.62□□□□□ -1.99
PTCD3-218ENST00000493430 ASH1LQ9NR48 2969 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 IGLV3-16A0A075B6K0 115 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 IGKV1-8A0A0C4DH67 115 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CXorf51AA0A1B0GTR3 108 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PN81 502 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PPV9 198 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SLC5A10A0PJK1 596 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 FEZF1A0PJY2 475 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 MGAT4DA6NG13 374 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TLCD2A6NGC4 264 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 MSGN1A6NI15 193 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF487B1APH4 448 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 H3BMH7 237 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 OGG1O15527 345 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF749O43361 778 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 VEGFDO43915 354 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KIF5CO60282 957 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PRKRAO75569 313 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CREG1O75629 220 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 VAPBO95292 243 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KRT14P02533 472 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 EIF2S1P05198 315 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TPM3P06753 285 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ATP1B2P14415 290 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM11P17152 192 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ALOX12P18054 663 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 NELFEP18615 380 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PTMSP20962 102 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SAT1P21673 171 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CA4P22748 312 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CHMP24386 653 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TEAD1P28347 426 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PRDX3P30048 256 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PKLRP30613 574 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 RORAP35398 523 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CHRNA7P36544 502 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SLC1A2P43004 574 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SLC1A1P43005 524 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 VSX2P58304 361 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 RPL26P61254 145 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CACNG1Q06432 222 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 DMPKQ09013 629 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 COX10Q12887 443 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KRT33BQ14525 404 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 BCL7AQ4VC05 210 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 VWA2Q5GFL6 755 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SEL1L2Q5TEA6 688 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 MLIPQ5VWP3 458 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ACSM2BQ68CK6 577 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF470Q6ECI4 717 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PPP1R2P3Q6NXS1 205 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 WDR74Q6RFH5 385 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 C16orf47Q6ZP98 133 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 LINC00696Q6ZRV3 163 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CENPUQ71F23 418 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PRSS42Q7Z5A4 293 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 R3HCC1LQ7Z5L2 792 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SNX20Q7Z614 316 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 OOSP2Q86WS3 158 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KLHL7Q8IXQ5 586 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 NKAIN3Q8N8D7 197 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 DNAAF3Q8N9W5 541 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF740Q8NDX6 193 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CATSPER1Q8NEC5 780 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KBTBD8Q8NFY9 601 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 OR5AP2Q8NGF4 316 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 OR5T3Q8NGG3 340 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 C9orf43Q8TAL5 461 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZFAND2BQ8WV99 257 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SKA2Q8WVK7 121 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 LCN9Q8WX39 176 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TFGQ92734 400 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 EXT2Q93063 718 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ESAMQ96AP7 390 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 MOAP1Q96BY2 351 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PYCR2Q96C36 320 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 C10orf90Q96M02 699 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TTC25Q96NG3 672 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF582Q96NG8 517 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 OR2A14Q96R47 310 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 COPS8Q99627 209 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 GPR21Q99679 349 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 OLFM1Q99784 485 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 DDA1Q9BW61 102 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 RAB11FIP5Q9BXF6 653 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 AICDAQ9GZX7 198 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 DPH5Q9H2P9 285 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SRMSQ9H3Y6 488 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KIR3DX1Q9H7L2 352 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 TREX1Q9NSU2 369 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SMOXQ9NWM0 555 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 UTP6Q9NYH9 597 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms