RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 FBXW10Q5XX13 1052 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 RNF128Q8TEB7 428 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 ST8SIA1Q92185 356 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 CPNE4Q96A23 557 aaPredicted RBP22.32■■□□□ 1.16
HMGN1-217ENST00000489072 GLRX2Q9NS18 164 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 KLHL28Q9NXS3 571 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 NDRG3Q9UGV2 375 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 LIPT1Q9Y234 373 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 SLC35A3Q9Y2D2 325 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 PRR14LQ5THK1 2151 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 A0A1W2PNR3 127 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 A0A1W2PPR1 153 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 GOSR1O95249 250 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 PGCP20142 388 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 AGTR1P30556 359 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 KCNJ5P48544 419 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 POLR2JP52435 117 aaKnown RBP22.31■■□□□ 1.16
HMGN1-217ENST00000489072 TXNL4AP83876 142 aaKnown RBP22.31■■□□□ 1.16
HMGN1-217ENST00000489072 MAPK11Q15759 364 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 EXOC3L2Q2M3D2 409 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 GTDC1Q4AE62 458 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 MIER2Q8N344 545 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 ABHD3Q8WU67 409 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 VPS33AQ96AX1 596 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 TIGARQ9NQ88 270 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 ACER3Q9NUN7 267 aa22.31■■□□□ 1.16
HMGN1-217ENST00000489072 ADAM11O75078 769 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 KRT75O95678 551 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 ZCCHC18P0CG32 403 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 H2AFXP16104 143 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-217ENST00000489072 ANXA11P50995 505 aaKnown RBP22.3■■□□□ 1.16
HMGN1-217ENST00000489072 ART1P52961 327 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 KCNJ10P78508 379 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 SPNS3Q6ZMD2 512 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 LRRC74BQ6ZQY2 392 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 MSANTD1Q6ZTZ1 278 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 C22orf34Q6ZV56 151 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 PLEKHM3Q6ZWE6 761 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 HDXQ7Z353 690 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 ZNF550Q7Z398 422 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 NINJ1Q92982 152 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 EBF4Q9BQW3 602 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 PLEKHF2Q9H8W4 249 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 TCF7L2Q9NQB0 619 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-217ENST00000489072 CCM2LQ9NUG4 571 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-217ENST00000489072 PLEKHA6Q9Y2H5 1048 aa22.3■■□□□ 1.16
HMGN1-217ENST00000489072 FAM234BA2RU67 622 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 AGAP5A6NIR3 686 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 C16orf97H3BN30 126 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 SIAH2O43255 324 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 TGDSO95455 350 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 IDH3AP50213 366 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 MERTKQ12866 999 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 C3orf33Q6P1S2 294 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 FCRLAQ7L513 359 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 TMEM234Q8WY98 164 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 CNOT9Q92600 299 aaKnown RBP22.29■■□□□ 1.16
HMGN1-217ENST00000489072 AURKBQ96GD4 344 aaPredicted RBP22.29■■□□□ 1.16
HMGN1-217ENST00000489072 ITCHQ96J02 903 aa22.29■■□□□ 1.16
HMGN1-217ENST00000489072 UQCRHLA0A096LP55 91 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 IGHV3-15A0A0B4J1V0 119 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 CASKO14936 926 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 PABPC4LP0CB38 370 aaKnown RBP22.28■■□□□ 1.16
HMGN1-217ENST00000489072 NR2F1P10589 423 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 ETFAP13804 333 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 KLK2P20151 261 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 RPS4Y1P22090 263 aaKnown RBP22.28■■□□□ 1.16
HMGN1-217ENST00000489072 ENPP1P22413 925 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 SLC7A1P30825 629 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 RYKP34925 604 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 MRPL19P49406 292 aaKnown RBP22.28■■□□□ 1.16
HMGN1-217ENST00000489072 GTF2IRD2BQ6EKJ0 949 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 GTF2IRD2Q86UP8 949 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 LSRQ86X29 649 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-217ENST00000489072 REXO5Q96IC2 774 aaKnown RBP22.28■■□□□ 1.16
HMGN1-217ENST00000489072 MED18Q9BUE0 208 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 CCDC106Q9BWC9 280 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 KLHL4Q9C0H6 718 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 C12orf49Q9H741 205 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 RMND5AQ9H871 391 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 TPT1P8Q9HAU6 139 aa22.28■■□□□ 1.16
HMGN1-217ENST00000489072 EXOSC3Q9NQT5 275 aaKnown RBP22.28■■□□□ 1.16
HMGN1-217ENST00000489072 HMGB1P1B2RPK0 211 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-217ENST00000489072 POLR3GO15318 223 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-217ENST00000489072 ANP32DO95626 131 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 ROS1P08922 2347 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 RAC3P60763 192 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 RNPS1Q15287 305 aaKnown RBP22.27■■□□□ 1.16
HMGN1-217ENST00000489072 ANKRD34AQ69YU3 496 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 PAMR1Q6UXH9 720 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 NUFIP2Q7Z417 695 aaKnown RBP22.27■■□□□ 1.16
HMGN1-217ENST00000489072 TUSC5Q8IXB3 177 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 ARFGAP2Q8N6H7 521 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 ZNF563Q8TA94 476 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 DYDC1Q8WWB3 177 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 GTF2H4Q92759 462 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 OR5B2Q96R09 309 aa22.27■■□□□ 1.16
HMGN1-217ENST00000489072 MTHFD2LQ9H903 347 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-217ENST00000489072 VIPAS39Q9H9C1 493 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms