RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 UBL4AP11441 157 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ENDOUP21128 410 aaKnown RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 F8A1P23610 371 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ABCD3P28288 659 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 OMPP47874 163 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 NRG3P56975 720 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 CDC42P60953 191 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 CSNK2BP67870 215 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 LAIR2Q6ISS4 152 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 FAM199XQ6PEV8 388 aaPredicted RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 ENTHD1Q8IYW4 607 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 OR5L2Q8NGL0 311 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 OR2Y1Q8NGV0 311 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 HS6ST2Q96MM7 605 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 B3GNT4Q9C0J1 378 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 IL17BQ9UHF5 180 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 PTRH2Q9Y3E5 179 aaKnown RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 A0A0B4J2E0 115 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 A0A1B0GX12 115 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 MPZL2O60487 215 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 ICOSLGO75144 302 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 KLF7O75840 302 aaPredicted RBP11.65□□□□□ -0.54
NELFE-209ENST00000488426 FPR3P25089 353 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 RBM34P42696 430 aaKnown RBP11.65□□□□□ -0.54
NELFE-209ENST00000488426 SLX4IPQ5VYV7 408 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 Q6ZPB1 254 aaPredicted RBP11.65□□□□□ -0.54
NELFE-209ENST00000488426 PRICKLE2Q7Z3G6 844 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 PRR22Q8IZ63 422 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 IL22RA1Q8N6P7 574 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 CNIH3Q8TBE1 160 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 TMEM255BQ8WV15 326 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 MPP4Q96JB8 637 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 FAM192AQ9GZU8 254 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 IMPAD1Q9NX62 359 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 FLRT3Q9NZU0 649 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 RNF6Q9Y252 685 aa11.65□□□□□ -0.54
NELFE-209ENST00000488426 SPTA1P02549 2419 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 TRBV11-1A0A0K0K1C0 115 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 A0A1B0GWA3 101 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 CDC14CA4D256 554 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 OR6C70A6NIJ9 312 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 H3BN98 237 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 NKX2-8O15522 239 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 KLF4O43474 513 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 ZFAND5O76080 213 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 DLGAP3O95886 979 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 IGHEP01854 428 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 TP53P04637 393 aaPredicted RBP11.64□□□□□ -0.55
NELFE-209ENST00000488426 UMODP07911 640 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 CD82P27701 267 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 STAT5AP42229 794 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 IDH2P48735 452 aaKnown RBP11.64□□□□□ -0.55
NELFE-209ENST00000488426 CDH15P55291 814 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 LSM11P83369 360 aaKnown RBP eCLIP11.64□□□□□ -0.552e-7■□□□□ 8.4
NELFE-209ENST00000488426 EFR3AQ14156 821 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 ULK3Q6PHR2 472 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 C6orf15Q6UXA7 325 aaPredicted RBP11.64□□□□□ -0.55
NELFE-209ENST00000488426 RASSF6Q6ZTQ3 369 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 NRMQ8IXM6 262 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 RHOXF1Q8NHV9 184 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 TMEM239Q8WW34 195 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 GPA33Q99795 319 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 MESP1Q9BRJ9 268 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 ZNF700Q9H0M5 742 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 RPS6KB2Q9UBS0 482 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 PADI1Q9ULC6 663 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 TMEM5Q9Y2B1 443 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 MRPS18BQ9Y676 258 aaKnown RBP11.64□□□□□ -0.55
NELFE-209ENST00000488426 RELNP78509 3460 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 EXPH5Q8NEV8 1989 aa11.64□□□□□ -0.55
NELFE-209ENST00000488426 A0A1W2PQ72 361 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 ALG1L2C9J202 215 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
NELFE-209ENST00000488426 ZNF264O43296 627 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 ADAM11O75078 769 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 OR6B1O95007 311 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 SOX14O95416 240 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 RAB40ALP0C0E4 278 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 NAGAP17050 411 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 EEF1B2P24534 225 aaKnown RBP11.63□□□□□ -0.55
NELFE-209ENST00000488426 POU1F1P28069 291 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 FOLR3P41439 243 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 COPZ1P61923 177 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 SKP2Q13309 424 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 PCOLCEQ15113 449 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 CD226Q15762 336 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 ALG10BQ5I7T1 473 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 ATP1A1-AS1Q5TC04 95 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 C12orf73Q69YU5 71 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 POGLUT1Q8NBL1 392 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 DNAJA4Q8WW22 397 aaPredicted RBP11.63□□□□□ -0.55
NELFE-209ENST00000488426 C8orf44Q96CB5 159 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 FAM46AQ96IP4 442 aaKnown RBP11.63□□□□□ -0.55
NELFE-209ENST00000488426 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 RASSF1Q9NS23 344 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 SCN3BQ9NY72 215 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 SELENONQ9NZV5 590 aa11.63□□□□□ -0.55
NELFE-209ENST00000488426 NDUFA13Q9P0J0 144 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms