RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 NTN1O95631 604 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 DBIP07108 87 aaKnown RBP20.06■□□□□ 0.8
CDHR3-212ENST00000487084 CTBP2P56545 445 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 IRX1P78414 480 aaPredicted RBP20.06■□□□□ 0.8
CDHR3-212ENST00000487084 RPS26P11Q5JNZ5 115 aaPredicted RBP20.06■□□□□ 0.8
CDHR3-212ENST00000487084 AP1ARQ63HQ0 302 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 C3orf33Q6P1S2 294 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 CMIPQ8IY22 773 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 STON2Q8WXE9 905 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 ROBO4Q8WZ75 1007 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 CNOT9Q92600 299 aaKnown RBP20.06■□□□□ 0.8
CDHR3-212ENST00000487084 TMEM19Q96HH6 336 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 SIKE1Q9BRV8 207 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 SRXN1Q9BYN0 137 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 RABEP2Q9H5N1 569 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 SERINC1Q9NRX5 453 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 THUMPD1Q9NXG2 353 aaKnown RBP20.06■□□□□ 0.8
CDHR3-212ENST00000487084 CALML5Q9NZT1 146 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 PROCRQ9UNN8 238 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 EMC9Q9Y3B6 208 aa20.06■□□□□ 0.8
CDHR3-212ENST00000487084 A0A1W2PNR3 127 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 A8MXE2 369 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 MSTNO14793 375 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 DNAJA2O60884 412 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 RPS4Y1P22090 263 aaKnown RBP20.05■□□□□ 0.8
CDHR3-212ENST00000487084 SORDQ00796 357 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 PLAURQ03405 335 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 RGNQ15493 299 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 MAPK11Q15759 364 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 ZNF239Q16600 458 aaKnown RBP20.05■□□□□ 0.8
CDHR3-212ENST00000487084 PAGE3Q5JUK9 113 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 PLEKHM3Q6ZWE6 761 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 FAM214BQ7L5A3 538 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 LINC01560Q8TB33 94 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 SLC38A5Q8WUX1 472 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 CPNE4Q96A23 557 aaPredicted RBP20.05■□□□□ 0.8
CDHR3-212ENST00000487084 COQ10BQ9H8M1 238 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 CACYBPQ9HB71 228 aaKnown RBP20.05■□□□□ 0.8
CDHR3-212ENST00000487084 EXOSC3Q9NQT5 275 aaKnown RBP20.05■□□□□ 0.8
CDHR3-212ENST00000487084 ACER3Q9NUN7 267 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 DNAJB12Q9NXW2 375 aaKnown RBP20.05■□□□□ 0.8
CDHR3-212ENST00000487084 SLAMF8Q9P0V8 285 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 CREBBPQ92793 2442 aa20.05■□□□□ 0.8
CDHR3-212ENST00000487084 HEATR5AQ86XA9 2040 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 ETV2O00321 342 aaPredicted RBP20.04■□□□□ 0.8
CDHR3-212ENST00000487084 NUDT7P0C024 238 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 TFPTP0C1Z6 253 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 CD1EP15812 388 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 KCNJ5P48544 419 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 SF3A3Q12874 501 aaKnown RBP eCLIP20.04■□□□□ 0.85e-6■■□□□ 14.3
CDHR3-212ENST00000487084 LIN52Q52LA3 116 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 LRIF1Q5T3J3 769 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 MRPL2Q5T653 305 aaKnown RBP20.04■□□□□ 0.8
CDHR3-212ENST00000487084 VRK2Q86Y07 508 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 FAM222BQ8WU58 562 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 GMPPAQ96IJ6 420 aaPredicted RBP20.04■□□□□ 0.8
CDHR3-212ENST00000487084 OR5B2Q96R09 309 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 TMEM120AQ9BXJ8 343 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 TMEM45AQ9NWC5 275 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 SLC25A37Q9NYZ2 338 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.04■□□□□ 0.8
CDHR3-212ENST00000487084 DCHS2Q6V1P9 2916 aa20.04■□□□□ 0.8
CDHR3-212ENST00000487084 AP3D1O14617 1153 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 TROVE2P10155 538 aaKnown RBP eCLIP20.03■□□□□ 0.8
CDHR3-212ENST00000487084 NID1P14543 1247 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 HOXB9P17482 250 aaPredicted RBP20.03■□□□□ 0.8
CDHR3-212ENST00000487084 IDH2P48735 452 aaKnown RBP20.03■□□□□ 0.8
CDHR3-212ENST00000487084 FADDQ13158 208 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 GUSBP1Q15486 140 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 MSRB3Q8IXL7 192 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 OR52P1PQ8NH57 321 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 PMM1Q92871 262 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 MAL2Q969L2 176 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 SLC52A3Q9NQ40 469 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 CTPS2Q9NRF8 586 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 FGFR1OP2Q9NVK5 253 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 CSMD1Q96PZ7 3565 aa20.03■□□□□ 0.8
CDHR3-212ENST00000487084 DSPPQ9NZW4 1301 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 A0A1W2PP18 115 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 ADAM11O75078 769 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 SS18L1O75177 396 aaPredicted RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 VIMP08670 466 aaKnown RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 PABPC4LP0CB38 370 aaKnown RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 TFPIP10646 304 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 FAM27E3Q08E93 113 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 GTF2IRD2BQ6EKJ0 949 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 ZNF474Q6S9Z5 364 aaPredicted RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 ZNF836Q6ZNA1 936 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 GRINAQ7Z429 371 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 GTF2IRD2Q86UP8 949 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 ZNF610Q8N9Z0 462 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 ABHD3Q8WU67 409 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 GPATCH1Q9BRR8 931 aaKnown RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 GLRX2Q9NS18 164 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 RLIMQ9NVW2 624 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 VAPAQ9P0L0 249 aa20.02■□□□□ 0.8
CDHR3-212ENST00000487084 LEF1Q9UJU2 399 aaPredicted RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 ZNF443Q9Y2A4 671 aaPredicted RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 SPIN1Q9Y657 262 aaPredicted RBP20.02■□□□□ 0.8
CDHR3-212ENST00000487084 LRBAP50851 2863 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms