RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 EDARQ9UNE0 448 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 KCNE3Q9Y6H6 103 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DOCK3Q8IZD9 2030 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 CDHR4A6H8M9 788 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DISC1C4P0D8 188 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 F5H5P2 479 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 GOSR2O14653 212 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 EIF3GO75821 320 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SERPINA3P01011 423 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 THY1P04216 161 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ZGLP1P0C6A0 271 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 PYCR1P32322 319 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 KCNJ3P48549 501 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ART1P52961 327 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SLC16A1P53985 500 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF85Q03923 595 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 IL10RAQ13651 578 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 MICBQ29980 383 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 OLFML2AQ68BL7 652 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SLC36A1Q7Z2H8 476 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 VRK2Q86Y07 508 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 RASGEF1AQ8N9B8 481 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 C2CD4CQ8TF44 421 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM255BQ8WV15 326 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ACOT11Q8WXI4 607 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 WNT2BQ93097 391 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TCEAL4Q96EI5 215 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 F2RL3Q96RI0 385 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 EQTNQ9NQ60 294 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 PLEKHM1Q9Y4G2 1056 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 NUP210Q8TEM1 1887 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 A0A1B0GW55 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 OR2W5A6NFC9 320 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 MAGEB4O15481 346 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF749O43361 778 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 EIF4E2O60573 245 aaKnown RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4L2P0CJ85 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4L3P0CJ86 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4L4P0CJ87 422 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4L5P0CJ88 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4L6P0CJ89 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4L7P0CJ90 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 FUT1P19526 365 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 NT5EP21589 574 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 BSGP35613 385 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 RFC3P40938 356 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 PRMT2P55345 433 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SORDQ00796 357 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TNFRSF17Q02223 184 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SMAD2Q15796 467 aaKnown RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 GUCA2BQ16661 112 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DECR1Q16698 335 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SWI5Q1ZZU3 235 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF311Q5JNZ3 666 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 RTP2Q5QGT7 225 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 HES5Q5TA89 166 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 MOB3CQ70IA8 216 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 C2orf73Q8N5S3 287 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM185AQ8NFB2 350 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 OR1M1Q8NGA1 313 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SCLYQ96I15 445 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TEAD3Q99594 435 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 SGPP1Q9BX95 441 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 TTTY10Q9BZA0 68 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ZCCHC3Q9NUD5 404 aaKnown RBP9.87□□□□□ -0.83
CCDC171-208ENST00000486641 DUX4Q9UBX2 424 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
CCDC171-208ENST00000486641 ABHD14A-ACY1A0A1B0GW23 586 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 NEDD8-MDP1E9PL57 170 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 KPNA3O00505 521 aaPredicted RBP9.86□□□□□ -0.83
CCDC171-208ENST00000486641 TBX19O60806 448 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 FABP1P07148 127 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 SPP1P10451 314 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 RPA2P15927 270 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 CNR1P21554 472 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 MAPK3P27361 379 aaPredicted RBP9.86□□□□□ -0.83
CCDC171-208ENST00000486641 NOS3P29474 1203 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 CD96P40200 585 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 PTH2RP49190 550 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 TAS2R43P59537 309 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 GMFBP60983 142 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 RPE65Q16518 533 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 STPG1Q5TH74 334 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 Q6ZVL8 140 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 FCRLAQ7L513 359 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 SSX6Q7RTT6 188 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 HSD11B1LQ7Z5J1 315 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 OR2AK2Q8NG84 335 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 SUN3Q8TAQ9 357 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 SFT2D1Q8WV19 159 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 SLC25A38Q96DW6 304 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 ARHGDIGQ99819 225 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 OR51V1Q9H2C8 321 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 GLIPR2Q9H4G4 154 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms