RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZKSCAN5Q9Y2L8 839 aa7.1□□□□□ -1.27
XRN1-212ENST00000486211 AMDHD2Q9Y303 409 aa7.1□□□□□ -1.27
XRN1-212ENST00000486211 CAPN6Q9Y6Q1 641 aa7.1□□□□□ -1.27
XRN1-212ENST00000486211 IGKV3D-15A0A087WSY6 115 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ALG1L2C9J202 215 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 GOLGA6L19H0YKK7 550 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ZNF195O14628 629 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 MPZL1O95297 269 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ERCC1P07992 297 aaPredicted RBP7.09□□□□□ -1.27
XRN1-212ENST00000486211 LTA4HP09960 611 aaKnown RBP7.09□□□□□ -1.27
XRN1-212ENST00000486211 CD1DP15813 335 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 COL8A2P25067 703 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 MYBPC1Q00872 1141 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ZNF155Q12901 538 aaPredicted RBP7.09□□□□□ -1.27
XRN1-212ENST00000486211 BAMBIQ13145 260 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 CPSF6Q16630 551 aaKnown RBP eCLIP7.09□□□□□ -1.27
XRN1-212ENST00000486211 SAXO2Q658L1 398 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 C11orf87Q6NUJ2 197 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 VHLLQ6RSH7 139 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 C17orf107Q6ZR85 190 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 MYLK4Q86YV6 388 aaPredicted RBP7.09□□□□□ -1.27
XRN1-212ENST00000486211 CDK20Q8IZL9 346 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 BCL6BQ8N143 479 aaPredicted RBP7.09□□□□□ -1.27
XRN1-212ENST00000486211 METTL4Q8N3J2 472 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 GATSQ8NAP1 163 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ZNF527Q8NB42 609 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 SLC16A11Q8NCK7 471 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 C1orf162Q8NEQ5 155 aaPredicted RBP7.09□□□□□ -1.27
XRN1-212ENST00000486211 MRAPQ8TCY5 172 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 TRPC4APQ8TEL6 797 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 SLC25A28Q96A46 364 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 SERPINI1Q99574 410 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 MCMBPQ9BTE3 642 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 TAS2R9Q9NYW1 312 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 OPTCQ9UBM4 332 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ZNF69Q9UC07 566 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 UTS2RQ9UKP6 389 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 ZNF780BQ9Y6R6 833 aa7.09□□□□□ -1.27
XRN1-212ENST00000486211 WNK2Q9Y3S1 2297 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 COL7A1Q02388 2944 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 A0A1B0GUS0 222 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 GJE1A6NN92 205 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 PSMG1O95456 288 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 OXSR1O95747 527 aaPredicted RBP7.08□□□□□ -1.28
XRN1-212ENST00000486211 MBD3O95983 291 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 KRT14P02533 472 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 ADRA2AP08913 450 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 MTHFD2P13995 350 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 CALCRP30988 508 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 EIF1P41567 113 aaKnown RBP7.08□□□□□ -1.28
XRN1-212ENST00000486211 SLC1A3P43003 542 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 RFX3P48380 749 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 PIK3CGP48736 1102 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 PRIM2P49643 509 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 LOXL3P58215 753 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 GALNT1Q10472 559 aaPredicted RBP7.08□□□□□ -1.28
XRN1-212ENST00000486211 TRADDQ15628 312 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 C1QTNF12Q5T7M4 302 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 C9orf135Q5VTT2 229 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 DCAF12L2Q5VW00 463 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 ABLIM2Q6H8Q1 611 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 ACSM5Q6NUN0 579 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 COMMD6Q7Z4G1 85 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 RIBC1Q8N443 379 aaPredicted RBP7.08□□□□□ -1.28
XRN1-212ENST00000486211 TEX9Q8N6V9 391 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 L3MBTL4Q8NA19 623 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 OR52E4Q8NGH9 312 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 OR4C3Q8NH37 302 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 EXT2Q93063 718 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 YIPF5Q969M3 257 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 APH1AQ96BI3 265 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 ZNF524Q96C55 264 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 SH3YL1Q96HL8 342 aaPredicted RBP7.08□□□□□ -1.28
XRN1-212ENST00000486211 SLC38A2Q96QD8 506 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 KATNB1Q9BVA0 655 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 TPK1Q9H3S4 243 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 ZNF442Q9H7R0 627 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 NPHS2Q9NP85 383 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 PPANQ9NQ55 473 aaKnown RBP7.08□□□□□ -1.28
XRN1-212ENST00000486211 MID2Q9UJV3 735 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 DCTN4Q9UJW0 460 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 PSME2Q9UL46 239 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 RNF11Q9Y3C5 154 aa7.08□□□□□ -1.28
XRN1-212ENST00000486211 GXYLT2A0PJZ3 443 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 SH3PXD2BA1X283 911 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ZNF716A6NP11 495 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 KIF2AO00139 706 aaPredicted RBP7.07□□□□□ -1.28
XRN1-212ENST00000486211 CBFA2T2O43439 604 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 UGDHO60701 494 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 GUCY1B2O75343 617 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 RP2O75695 350 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 HPXP02790 462 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 S100BP04271 92 aaPredicted RBP7.07□□□□□ -1.28
XRN1-212ENST00000486211 NGFRP08138 427 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ANPEPP15144 967 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 SELEP16581 610 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 NPR2P20594 1047 aa7.07□□□□□ -1.28
XRN1-212ENST00000486211 ACHEP22303 614 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms