RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 THUMPD1Q9NXG2 353 aaKnown RBP13.48□□□□□ -0.25
HLA-F-226ENST00000484704 DNAJB12Q9NXW2 375 aaKnown RBP13.48□□□□□ -0.25
HLA-F-226ENST00000484704 NDRG3Q9UGV2 375 aa13.48□□□□□ -0.25
HLA-F-226ENST00000484704 CLEC4AQ9UMR7 237 aa13.48□□□□□ -0.25
HLA-F-226ENST00000484704 TRIM33Q9UPN9 1127 aa13.48□□□□□ -0.25
HLA-F-226ENST00000484704 SPIN1Q9Y657 262 aaPredicted RBP13.48□□□□□ -0.25
HLA-F-226ENST00000484704 A8MXE2 369 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 ADAMDEC1O15204 470 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 AQP8O94778 261 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 C1QCP02747 245 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 BCHEP06276 602 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 DBIP07108 87 aaKnown RBP13.47□□□□□ -0.25
HLA-F-226ENST00000484704 TFPIP10646 304 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 ETFAP13804 333 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 UQCRBP14927 111 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 CD1EP15812 388 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 HOXB4P17483 251 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-226ENST00000484704 IL11P20809 199 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 SLC6A8P48029 635 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 CRISP3P54108 245 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 FUT5Q11128 374 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 SQLEQ14534 574 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 MAPK14Q16539 360 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 GTDC1Q4AE62 458 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 AGKQ53H12 422 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 C3orf33Q6P1S2 294 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 FAM214BQ7L5A3 538 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 BTLAQ7Z6A9 289 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 GMPPAQ96IJ6 420 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-226ENST00000484704 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 POLDIP3Q9BY77 421 aaKnown RBP13.47□□□□□ -0.25
HLA-F-226ENST00000484704 QRSL1Q9H0R6 528 aaKnown RBP13.47□□□□□ -0.25
HLA-F-226ENST00000484704 OPN3Q9H1Y3 402 aaPredicted RBP13.47□□□□□ -0.25
HLA-F-226ENST00000484704 RABEP2Q9H5N1 569 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 GLRX2Q9NS18 164 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 JKAMPQ9P055 326 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
HLA-F-226ENST00000484704 C5orf58C9J3I9 102 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 CLIC1O00299 241 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 CHRM4P08173 479 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 POU2F1P14859 743 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 PGM1P36871 562 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 KIR2DL2P43627 348 aaPredicted RBP13.46□□□□□ -0.25
HLA-F-226ENST00000484704 ATP4BP51164 291 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 SESN3P58005 492 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 IRX1P78414 480 aaPredicted RBP13.46□□□□□ -0.25
HLA-F-226ENST00000484704 EXOC3L2Q2M3D2 409 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 CTU2Q2VPK5 515 aaKnown RBP13.46□□□□□ -0.25
HLA-F-226ENST00000484704 LIN52Q52LA3 116 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 SLC25A53Q5H9E4 307 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 TMEM201Q5SNT2 666 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 STK32CQ86UX6 486 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 CMIPQ8IY22 773 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 ROBO4Q8WZ75 1007 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 GTF2H4Q92759 462 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 PMM1Q92871 262 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 AURKBQ96GD4 344 aaPredicted RBP13.46□□□□□ -0.25
HLA-F-226ENST00000484704 ADGRG7Q96K78 797 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 GPATCH1Q9BRR8 931 aaKnown RBP13.46□□□□□ -0.25
HLA-F-226ENST00000484704 TMUB1Q9BVT8 246 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 SLC38A1Q9H2H9 487 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 ARMC7Q9H6L4 198 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 ACER3Q9NUN7 267 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 ZNF232Q9UNY5 417 aa13.46□□□□□ -0.25
HLA-F-226ENST00000484704 PRRC2AP48634 2157 aaKnown RBP13.46□□□□□ -0.25
HLA-F-226ENST00000484704 A0A0G2JND7 137 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 A0A1W2PNR3 127 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 PRAMEF27A3QJZ7 478 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 SH3D21A4FU49 640 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 AGAP5A6NIR3 686 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 CLDN24A6NM45 220 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 CD8BP10966 210 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 EPXP11678 715 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 CD99P14209 185 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 SHC1P29353 583 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 DNAJA1P31689 397 aaKnown RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 CD79BP40259 229 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 APOBEC1P41238 236 aaKnown RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 IDH2P48735 452 aaKnown RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 IST1P53990 364 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 ZNF239Q16600 458 aaKnown RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 BLOC1S3Q6QNY0 202 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 PLEKHM3Q6ZWE6 761 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 ZNF610Q8N9Z0 462 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 OR6K3Q8NGY3 331 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 SLC25A43Q8WUT9 341 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 CNOT9Q92600 299 aaKnown RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 ZG16BQ96DA0 208 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 SIKE1Q9BRV8 207 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 CLEC4MQ9H2X3 399 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 EXOSC3Q9NQT5 275 aaKnown RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 SLC6A13Q9NSD5 602 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 ELOVL5Q9NYP7 299 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-226ENST00000484704 EDARQ9UNE0 448 aa13.45□□□□□ -0.26
HLA-F-226ENST00000484704 PCDHB14Q9Y5E9 798 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms