RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 ZNF440Q8IYI8 595 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 OR52P1PQ8NH57 321 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 FNDC9Q8TBE3 224 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 FIG4Q92562 907 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 CNOT9Q92600 299 aaKnown RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 OSTF1Q92882 214 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 ZNF524Q96C55 264 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 TMEM19Q96HH6 336 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 ZNF845Q96IR2 970 aaPredicted RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 TMEM38AQ9H6F2 299 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 GLRX2Q9NS18 164 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 DNAJB12Q9NXW2 375 aaKnown RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 MCTS1Q9ULC4 181 aaKnown RBP11.1□□□□□ -0.63
MRPL55-229ENST00000483159 IFT52Q9Y366 437 aa11.1□□□□□ -0.63
MRPL55-229ENST00000483159 CDHR4A6H8M9 788 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 CLDN24A6NM45 220 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 C5orf58C9J3I9 102 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 TNFSF11O14788 317 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 SLC22A2O15244 555 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 CXCL13O43927 109 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 BCAS1O75363 584 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 TNFSF13O75888 250 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PGM3O95394 542 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 NPPAP01160 153 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 NUDT7P0C024 238 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 ETS2P15036 469 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 SSTR2P30874 369 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PCYT1AP49585 367 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 CLK1P49759 484 aaKnown RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 MAP2K6P52564 334 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PLAURQ03405 335 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 MERTKQ12866 999 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 COQ5Q5HYK3 327 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 GCNT6Q5T4J0 391 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 REEP3Q6NUK4 255 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 C3orf33Q6P1S2 294 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PLXDC2Q6UX71 529 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PLEKHM3Q6ZWE6 761 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 GRINAQ7Z429 371 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 KIF18BQ86Y91 864 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 MCEMP1Q8IX19 187 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 GCNT2Q8N0V5 402 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 ZNF563Q8TA94 476 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 BBS10Q8TAM1 723 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 SLC35B4Q969S0 331 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 CPNE4Q96A23 557 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 C14orf79Q96F83 325 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 ANKRD27Q96NW4 1050 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 CCDC106Q9BWC9 280 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PRRG4Q9BZD6 226 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 TRIM8Q9BZR9 551 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 TMEM185BQ9H7F4 350 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 SAR1AQ9NR31 198 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PACSIN3Q9UKS6 424 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 SPIN1Q9Y657 262 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-229ENST00000483159 PCNX1Q96RV3 2341 aa11.09□□□□□ -0.63
MRPL55-229ENST00000483159 FREM3P0C091 2139 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 CFAP73A6NFT4 308 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 MSTNO14793 375 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 AQP8O94778 261 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 OPN1LWP04000 364 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 ARAFP10398 606 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 UQCRC1P31930 480 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 RYKP34925 604 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 SFTPDP35247 375 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 SLC1A3P43003 542 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 KIR2DL2P43627 348 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-229ENST00000483159 IDH2P48735 452 aaKnown RBP11.08□□□□□ -0.64
MRPL55-229ENST00000483159 AGFG1P52594 562 aaKnown RBP11.08□□□□□ -0.64
MRPL55-229ENST00000483159 RAC3P60763 192 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 CDK6Q00534 326 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 KLF10Q13118 480 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 MAPRE2Q15555 327 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 FAM214BQ7L5A3 538 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 ZNF550Q7Z398 422 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 GDF7Q7Z4P5 450 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 HMGN2P46Q86SG4 172 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 DHDDSQ86SQ9 333 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 RETREG3Q86VR2 466 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 KRT73Q86Y46 540 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 ZNF295-AS1Q8N0V1 137 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 MAL2Q969L2 176 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 STARD4Q96DR4 205 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 REXO5Q96IC2 774 aaKnown RBP11.08□□□□□ -0.64
MRPL55-229ENST00000483159 GMPPAQ96IJ6 420 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-229ENST00000483159 CGREF1Q99674 301 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 SH3GL1Q99961 368 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 CPPED1Q9BRF8 314 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-229ENST00000483159 SPATA5L1Q9BVQ7 753 aa11.08□□□□□ -0.64
MRPL55-229ENST00000483159 SPATA9Q9BWV2 254 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms