RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 OR1L3Q8NH93 324 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 WIPF2Q8TF74 440 aaPredicted RBP5.96□□□□□ -1.46
CLK1-212ENST00000482590 NAT14Q8WUY8 206 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.96□□□□□ -1.466e-6■□□□□ 9.8
CLK1-212ENST00000482590 PNPLA2Q96AD5 504 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 DAZAP1Q96EP5 407 aaKnown RBP5.96□□□□□ -1.46
CLK1-212ENST00000482590 HARBI1Q96MB7 349 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 IP6K3Q96PC2 410 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 PPP1R2P1Q96PQ5 205 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 BTBD9Q96Q07 612 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 CHP1Q99653 195 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 APOL2Q9BQE5 337 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 NUDT9Q9BW91 350 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 SIRPDQ9H106 197 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 ACTR8Q9H981 624 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 Q9N2J8 555 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 MLXIPLQ9NP71 852 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 TXLNGQ9NUQ3 528 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 GRHL1Q9NZI5 618 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 IL20RAQ9UHF4 553 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 ICKQ9UPZ9 632 aa5.96□□□□□ -1.46
CLK1-212ENST00000482590 FAM240BA0A1B0GVZ2 78 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 A0A1W2PPQ1 181 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 TMEM247A6NEH6 219 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ANKRD61A6NGH8 418 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 H3BMM5 538 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 BTN3A3O00478 584 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 CES2O00748 559 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 TRIM3O75382 744 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 ZNF189O75820 626 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 CEACAM4O75871 244 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 HLA-DQA2P01906 255 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 MBPP02686 304 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 FHP07954 510 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 TROVE2P10155 538 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLK1-212ENST00000482590 FCGR2AP12318 317 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ATP1B2P14415 290 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 HTR2AP28223 471 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 CD1BP29016 333 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 PRDX3P30048 256 aaKnown RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 S100A5P33763 92 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SHMT2P34897 504 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 RORAP35398 523 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 LIPAP38571 399 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 MARCKSL1P49006 195 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 AGTR2P50052 363 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ZNF140P52738 457 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 PLTPP55058 493 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 OTUD4Q01804 1114 aaKnown RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 DEFB110Q30KQ9 67 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 GPR33Q49SQ1 333 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SYTL3Q4VX76 610 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 GPAT3Q53EU6 434 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 PRR30Q53SZ7 412 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 VWA5B1Q5TIE3 1220 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 MLIPQ5VWP3 458 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 LYPLAL1Q5VWZ2 237 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 CARD17Q5XLA6 110 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 TTC19Q6DKK2 380 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 HIST2H2BCQ6DN03 193 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 OR7E24Q6IFN5 339 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 C11orf63Q6NUN7 778 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 LCTLQ6UWM7 567 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 HAPLN4Q86UW8 402 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 AMIGO1Q86WK6 493 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 RCOR2Q8IZ40 523 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 IQCKQ8N0W5 287 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 KRT222Q8N1A0 295 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SLC38A9Q8NBW4 561 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 TM9SF4Q92544 642 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SMC6Q96SB8 1091 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SEPHS2Q99611 448 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SH3GL1Q99961 368 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 TBL1YQ9BQ87 522 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ZNF559Q9BR84 538 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ALG12Q9BV10 488 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 MRPL13Q9BYD1 178 aaKnown RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 PITPNM3Q9BZ71 974 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ILKAPQ9H0C8 392 aaPredicted RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 GOLPH3Q9H4A6 298 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 MVB12BQ9H7P6 319 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 LZTFL1Q9NQ48 299 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 SPATA7Q9P0W8 599 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 PEF1Q9UBV8 284 aaKnown RBP5.95□□□□□ -1.46
CLK1-212ENST00000482590 CHMP2BQ9UQN3 213 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 ALG6Q9Y672 507 aa5.95□□□□□ -1.46
CLK1-212ENST00000482590 A0A0U1RQV5 110 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 VWC2LB2RUY7 222 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 TCP11X1B4DZS4 312 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 F5H697 171 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 SLC28A1O00337 649 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 KCNN4O15554 427 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 ZNF749O43361 778 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 LDB2O43679 373 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 TRIAP1O43715 76 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 OR2B3O76000 313 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 FTH1P02794 183 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 CAPN1P07384 714 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 CD63P08962 238 aa5.94□□□□□ -1.46
CLK1-212ENST00000482590 PABPC4LP0CB38 370 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms