RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 OR12D1P0DN82 309 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 BGNP21810 368 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 ENPP1P22413 925 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 IL32P24001 234 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 CLNS1AP54105 237 aaKnown RBP11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 PLAURQ03405 335 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 P2RY6Q15077 328 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 HEPHL1Q6MZM0 1159 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 ALKBH2Q6NS38 261 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 C3orf33Q6P1S2 294 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 TFAP2EQ6VUC0 442 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 NUFIP2Q7Z417 695 aaKnown RBP11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 GABRG1Q8N1C3 465 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 ST8SIA1Q92185 356 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 HSD17B8Q92506 261 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 TESCQ96BS2 214 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 S100PBPQ96BU1 408 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 Q96MF0 132 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 SMR3AQ99954 134 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 ZNF350Q9GZX5 532 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 BCO1Q9HAY6 547 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 POLE3Q9NRF9 147 aa11.96□□□□□ -0.49
CTDSP1-208ENST00000482272 HEATR5AQ86XA9 2040 aa11.96□□□□□ -0.5
CTDSP1-208ENST00000482272 IGHV3-15A0A0B4J1V0 119 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 DNAJA2O60884 412 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 PLAUP00749 431 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 UBTFL6P0CB48 400 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 FKBP2P26885 142 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 S100A3P33764 101 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 CHI3L1P36222 383 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 APOBEC1P41238 236 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 SESN3P58005 492 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 CSNK2A1P68400 391 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 RASGEF1BQ0VAM2 473 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 FUT5Q11128 374 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 SKP2Q13309 424 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 ITGADQ13349 1161 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 CEP85LQ5SZL2 805 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 ANKRD46Q86W74 232 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF611Q8N823 705 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF563Q8TA94 476 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 KISS1RQ969F8 398 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 TEX37Q96LM6 180 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 OR5B2Q96R09 309 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 PSD2Q9BQI7 771 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 TMEM204Q9BSN7 226 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 NUF2Q9BZD4 464 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 GSX2Q9BZM3 304 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 ESRP2Q9H6T0 727 aaKnown RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 RAB21Q9UL25 225 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 SLC35A3Q9Y2D2 325 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 WDR45Q9Y484 360 aa11.95□□□□□ -0.5
CTDSP1-208ENST00000482272 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 H7C1Q1 480 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SULT2B1O00204 365 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 HS3ST1O14792 307 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 CYTIPO60759 359 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 HEXAP06865 529 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 CD3EP07766 207 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 ALDOCP09972 364 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 PAX1P15863 534 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 PGM1P36871 562 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 PTH2RP49190 550 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 HPCAP84074 193 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 MERTKQ12866 999 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 CAPRIN1Q14444 709 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 CASP8Q14790 479 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 TSC22D1Q15714 1073 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 MAPK14Q16539 360 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 GPAT3Q53EU6 434 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 AP1ARQ63HQ0 302 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SAXO2Q658L1 398 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 TYW3Q6IPR3 259 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 TNFAIP8L2Q6P589 184 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 TMPPEQ6ZT21 453 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF619Q8N2I2 560 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 TRIML2Q8N7C3 387 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SLC25A43Q8WUT9 341 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 AKAP1Q92667 903 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 RAB8BQ92930 207 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 ROPN1LQ96C74 230 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 PAIP2Q9BPZ3 127 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SLC35A5Q9BS91 424 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SAP130Q9H0E3 1048 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 MEAF6Q9HAF1 191 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 ACER3Q9NUN7 267 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 MARCOQ9UEW3 520 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 BTNL2Q9UIR0 455 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 HAO1Q9UJM8 370 aa11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SPIN1Q9Y657 262 aaPredicted RBP11.94□□□□□ -0.5
CTDSP1-208ENST00000482272 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 DSCAMO60469 2012 aa11.93□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF724A8MTY0 619 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms