RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SLC38A1Q9H2H9 487 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 COQ10BQ9H8M1 238 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 EXOSC3Q9NQT5 275 aaKnown RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 SLC6A13Q9NSD5 602 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 NDRG3Q9UGV2 375 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 PRRC2AP48634 2157 aaKnown RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 ANP32DO95626 131 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 CHRM4P08173 479 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 NID1P14543 1247 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 IDH3AP50213 366 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 SESN3P58005 492 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 KCNJ10P78508 379 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 FAM27E3Q08E93 113 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 SYPL1Q16563 259 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 C3orf33Q6P1S2 294 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 CMIPQ8IY22 773 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 PNPT1Q8TCS8 783 aaKnown RBP15.21■□□□□ 0.03
HSPG2-209ENST00000480900 RNF128Q8TEB7 428 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 ZG16BQ96DA0 208 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 REXO5Q96IC2 774 aaKnown RBP15.21■□□□□ 0.03
HSPG2-209ENST00000480900 CCDC28BQ9BUN5 200 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 SRXN1Q9BYN0 137 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 PLSCR4Q9NRQ2 329 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 ACER3Q9NUN7 267 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 ITGB1BP2Q9UKP3 347 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 TESMINQ9Y4I5 508 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 AKAP9Q99996 3911 aa15.21■□□□□ 0.03
HSPG2-209ENST00000480900 UQCRHLA0A096LP55 91 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 AGAP5A6NIR3 686 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 BCAS1O75363 584 aaPredicted RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 NR2F1P10589 423 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 POU2F1P14859 743 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 RPS4Y1P22090 263 aaKnown RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 SLC7A1P30825 629 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 DNAJA1P31689 397 aaKnown RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 UGT2B10P36537 528 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 MVDP53602 400 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 RNPS1Q15287 305 aaKnown RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 CDC20BQ86Y33 519 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 ZNF610Q8N9Z0 462 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 ATP6V1C2Q8NEY4 427 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 SLC25A43Q8WUT9 341 aaPredicted RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 NRGNQ92686 78 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 VPS33AQ96AX1 596 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 EBF4Q9BQW3 602 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 QRSL1Q9H0R6 528 aaKnown RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 MTHFD2LQ9H903 347 aaPredicted RBP15.2■□□□□ 0.02
HSPG2-209ENST00000480900 TPT1P8Q9HAU6 139 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 GP6Q9HCN6 339 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 P2RX2Q9UBL9 471 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 CLEC4AQ9UMR7 237 aa15.2■□□□□ 0.02
HSPG2-209ENST00000480900 ARID1AO14497 2285 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 C16orf97H3BN30 126 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 AGTR1P30556 359 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 CCKARP32238 428 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 KCNJ5P48544 419 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 AQP5P55064 265 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 RAC3P60763 192 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 IRX1P78414 480 aaPredicted RBP15.19■□□□□ 0.02
HSPG2-209ENST00000480900 PLAURQ03405 335 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 MERTKQ12866 999 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 TESK1Q15569 626 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 C6orf10Q5SRN2 563 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 HMGN2P46Q86SG4 172 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 ARFGAP2Q8N6H7 521 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 ABHD3Q8WU67 409 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 CKAP2Q8WWK9 683 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 STON2Q8WXE9 905 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 ROBO4Q8WZ75 1007 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 GTF2H4Q92759 462 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 NINJ1Q92982 152 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 SERINC1Q9NRX5 453 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 THUMPD1Q9NXG2 353 aaKnown RBP15.19■□□□□ 0.02
HSPG2-209ENST00000480900 CALML5Q9NZT1 146 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 EDARQ9UNE0 448 aa15.19■□□□□ 0.02
HSPG2-209ENST00000480900 CLDN24A6NM45 220 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 CASKO14936 926 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 DBIP07108 87 aaKnown RBP15.18■□□□□ 0.02
HSPG2-209ENST00000480900 APOBEC1P41238 236 aaKnown RBP15.18■□□□□ 0.02
HSPG2-209ENST00000480900 CRATP43155 626 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 DSTNP60981 165 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 GNA13Q14344 377 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 MAPK11Q15759 364 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 GTDC1Q4AE62 458 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 FBXW10Q5XX13 1052 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 PLEKHM3Q6ZWE6 761 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 FCRLAQ7L513 359 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 PEX5LQ8IYB4 626 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 SLC43A2Q8N370 569 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 ZNF563Q8TA94 476 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 WDR60Q8WVS4 1066 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 CNOT9Q92600 299 aaKnown RBP15.18■□□□□ 0.02
HSPG2-209ENST00000480900 AURKBQ96GD4 344 aaPredicted RBP15.18■□□□□ 0.02
HSPG2-209ENST00000480900 MAGEB18Q96M61 343 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 CCDC106Q9BWC9 280 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 RAD21L1Q9H4I0 556 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 FANCFQ9NPI8 374 aa15.18■□□□□ 0.02
HSPG2-209ENST00000480900 TMEM45AQ9NWC5 275 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms