RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PLEKHM3Q6ZWE6 761 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 GRINAQ7Z429 371 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 TSPYL5Q86VY4 417 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 GTPBP8Q8N3Z3 284 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 FAM109AQ8N4B1 249 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 TMEM251Q8N6I4 163 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 Q8NA96 180 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 PIK3C3Q8NEB9 887 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZNF563Q8TA94 476 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 ADAMTS16Q8TE57 1224 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 DNAJA4Q8WW22 397 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 C3orf49Q96BT1 292 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZNF524Q96C55 264 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 JSRP1Q96MG2 331 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 GNRHR2Q96P88 292 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 PIP5K1AQ99755 562 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 CHID1Q9BWS9 393 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 ADAM19Q9H013 955 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 TMEM27Q9HBJ8 222 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 ACKR4Q9NPB9 350 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 DKKL1Q9UK85 242 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 AP4S1Q9Y587 144 aa11.38□□□□□ -0.59
TRAPPC12-218ENST00000479897 MPDZO75970 2070 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 A0A1B0GWA3 101 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 H3BNX3 289 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 hCG_2039718K7EN88 272 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 FFAR1O14842 300 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ADAMDEC1O15204 470 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 HNRNPRO43390 633 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 CHP2O43745 196 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZIC3O60481 467 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 LYPD3O95274 346 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 GP1BBP13224 206 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 GDF1P27539 372 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 IFNA8P32881 189 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 IDH2P48735 452 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ERFP50548 548 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 MAP2K6P52564 334 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 SESN3P58005 492 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 PPIAP62937 165 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 PLGLB1Q02325 96 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 KLRB1Q12918 225 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 PLEKHN1Q494U1 663 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ULK3Q6PHR2 472 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ATG4DQ86TL0 474 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 SIAH3Q8IW03 269 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 LSM14AQ8ND56 463 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 FAM83FQ8NEG4 500 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 POC1BQ8TC44 478 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 PYDC1Q8WXC3 89 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC38A4Q969I6 547 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 MPP4Q96JB8 637 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 TAAR6Q96RI8 345 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 UBL7Q96S82 380 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 FAM32AQ9Y421 112 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-218ENST00000479897 ATRXP46100 2492 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 CACNA1BQ00975 2339 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 A0A1W2PRQ8 180 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 CPSF4LA6NMK7 179 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 LINC01387J3KSC0 135 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 J3KTA2 159 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 DEAF1O75398 565 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 IGHG3P01860 377 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 CRYABP02511 175 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 THY1P04216 161 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 PNMTP11086 282 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 HK1P19367 917 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 APOBEC1P41238 236 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 MAGEA5P43359 124 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 POLR2HP52434 150 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 TAS2R41P59536 307 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 PMP22Q01453 160 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 FOXF1Q12946 379 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 PIN1Q13526 163 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 DGCR6Q14129 220 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 ALG10BQ5I7T1 473 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 OR2T5Q6IEZ7 315 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 CADM2Q8N3J6 435 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 OR2T29Q8NH02 315 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 STMN2Q93045 179 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC41A3Q96GZ6 507 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 PIGQQ9BRB3 760 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 S100A14Q9HCY8 104 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 MAN2C1Q9NTJ4 1040 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 RPS6KB2Q9UBS0 482 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 DNAJB9Q9UBS3 223 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 OSGIN1Q9UJX0 560 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 VDAC3Q9Y277 283 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 NTNG1Q9Y2I2 539 aa11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 RRP15Q9Y3B9 282 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZNF407Q9C0G0 2248 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms