RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GNB5O14775 395 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 PGCP20142 388 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 CASP3P42574 277 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 GSSP48637 474 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 ESRRGP62508 458 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 MYBPC1Q00872 1141 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 ALDH6A1Q02252 535 aaKnown RBP26.3■■□□□ 1.8
VEGFA-211ENST00000476772 COX10Q12887 443 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 TSPAN31Q12999 210 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 COL28A1Q2UY09 1125 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 KRCC1Q9NPI7 259 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-211ENST00000476772 MED31Q9Y3C7 131 aa26.3■■□□□ 1.8
VEGFA-211ENST00000476772 EIF4E1BA6NMX2 242 aaKnown RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 B4DXG7 233 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 TP53P04637 393 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 IGFBP1P08833 259 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 CHMP24386 653 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 RBM34P42696 430 aaKnown RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 CRISP1P54107 249 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 IL18R1Q13478 541 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 ZNF468Q5VIY5 522 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 JMJD6Q6NYC1 403 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 DND1Q8IYX4 353 aaKnown RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 HRASLS5Q96KN8 279 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 MEPEQ9NQ76 525 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-211ENST00000476772 PNPLA3Q9NST1 481 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 C20orf141Q9NUB4 165 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 HPF1Q9NWY4 346 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 HRH3Q9Y5N1 445 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 WIF1Q9Y5W5 379 aa26.29■■□□□ 1.8
VEGFA-211ENST00000476772 A0A087WUJ7 227 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 KLF4O43474 513 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 GSTM3P21266 225 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 FPR3P25089 353 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 ACER2Q5QJU3 275 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 ATG4DQ86TL0 474 aaPredicted RBP26.28■■□□□ 1.8
VEGFA-211ENST00000476772 P3H2Q8IVL5 708 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 NXPE2Q96DL1 559 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 DSN1Q9H410 356 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 KLK13Q9UKR3 277 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 DOCK10Q96BY6 2186 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 LYNP07948 512 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 IFI30P13284 250 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 POU1F1P28069 291 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 SLC1A3P43003 542 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 PRKCDQ05655 676 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 MEP1AQ16819 746 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 PRAMEF20Q5VT98 475 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 TTC33Q6PID6 262 aaPredicted RBP26.28■■□□□ 1.8
VEGFA-211ENST00000476772 THAP5Q7Z6K1 395 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 GPR119Q8TDV5 335 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 FER1L6-AS2Q96M78 137 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 ATP13A2Q9NQ11 1180 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 RYDENQ9NUL5 291 aaKnown RBP26.28■■□□□ 1.8
VEGFA-211ENST00000476772 PPP4R1LQ9P1A2 415 aa26.28■■□□□ 1.8
VEGFA-211ENST00000476772 PCNX3Q9H6A9 2034 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 H3BN98 237 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 FOXC1Q12948 553 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 AIMP2Q13155 320 aaKnown RBP26.27■■□□□ 1.8
VEGFA-211ENST00000476772 PTGES3Q15185 160 aaKnown RBP26.27■■□□□ 1.8
VEGFA-211ENST00000476772 KIF18BQ86Y91 864 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 CCDC71Q8IV32 467 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-211ENST00000476772 SECISBP2Q96T21 854 aaKnown RBP26.27■■□□□ 1.8
VEGFA-211ENST00000476772 SH2D2AQ9NP31 389 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 SDHAF3Q9NRP4 125 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 MED11Q9P086 117 aa26.27■■□□□ 1.8
VEGFA-211ENST00000476772 CCL3P10147 92 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 MAKP20794 623 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 SDHBP21912 280 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 ITGA3P26006 1051 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 QPRTQ15274 297 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 TMEM81Q6P7N7 255 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 CCNL2Q96S94 520 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-211ENST00000476772 DPH1Q9BZG8 443 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 ADAM19Q9H013 955 aa26.26■■□□□ 1.79
VEGFA-211ENST00000476772 FREM2Q5SZK8 3169 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 MAGEA13PA6NCF6 341 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ANKUB1A6NFN9 424 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ELOA3DA6NLF2 546 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ZAR1LA6NP61 321 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 CDC42EP2O14613 210 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 CDC40O60508 579 aaKnown RBP eCLIP26.25■■□□□ 1.792e-13■■□□□ 11.5
VEGFA-211ENST00000476772 PNMTP11086 282 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 TACR3P29371 465 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 GGT2P36268 569 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 RPS6KA3P51812 740 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 SUMO3P55854 103 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-211ENST00000476772 CTBP2P56545 445 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ISL1P61371 349 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 IL5RAQ01344 420 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 TBC1D25Q3MII6 688 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ELOA3BQ3SY89 546 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 TMEM236Q5W0B7 351 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 BEST3Q8N1M1 668 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 SETD9Q8NE22 299 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ELOA3Q8NG57 546 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 PAQR8Q8TEZ7 354 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 BPIFA2Q96DR5 249 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 APOL4Q9BPW4 351 aa26.25■■□□□ 1.79
VEGFA-211ENST00000476772 ING2Q9H160 280 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms