RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 HIST3H2AQ7L7L0 130 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FAM220AQ7Z4H9 259 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RANBP3LQ86VV4 465 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SDR16C5Q8N3Y7 309 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR5D18Q8NGL1 313 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR5P2Q8WZ92 322 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 NSMAFQ92636 917 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HIST1H2ACQ93077 130 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CRELD1Q96HD1 420 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 KATNB1Q9BVA0 655 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TTLL2Q9BWV7 592 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HCAR1Q9BXC0 346 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CHST8Q9H2A9 424 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 NEUROD4Q9HD90 331 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 B3GAT2Q9NPZ5 323 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 C1GALT1Q9NS00 363 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FBXL2Q9UKC9 423 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 VDAC3Q9Y277 283 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM5Q9Y2B1 443 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 IGHV3-20A0A0C4DH32 117 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 IGHV3-64DA0A0J9YX35 117 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 EEF1E1-BLOC1S5C9J1V9 151 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 QSOX1O00391 747 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RNASET2O00584 256 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SELENOFO60613 162 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC25A12O75746 678 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RPLP2P05387 115 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ARAFP10398 606 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 NDUFV2P19404 249 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CCKBRP32239 447 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 PTGS2P35354 604 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RPL3P39023 403 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RPL35P42766 123 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HTR3AP46098 478 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 PRKXP51817 358 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 IRF4Q15306 451 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FBXO43Q4G163 708 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ACSM3Q53FZ2 586 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FAM74A1Q5RGS3 127 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TCEAL6Q6IPX3 200 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ZCCHC12Q6PEW1 402 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CFAP77Q6ZQR2 320 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 COMTD1Q86VU5 262 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ADGRF3Q8IZF5 1079 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DENND6BQ8NEG7 585 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR4D9Q8NGE8 314 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR8J2Q8NGG1 315 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 PHOSPHO2Q8TCD6 241 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TCEAL3Q969E4 200 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RFKQ969G6 155 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CNRIP1Q96F85 164 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DTD2Q96FN9 168 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CAMK1GQ96NX5 476 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TGM7Q96PF1 710 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 EPYCQ99645 322 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ENKD1Q9H0I2 346 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FGF22Q9HCT0 170 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TRIM36Q9NQ86 728 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TAS2R7Q9NYW3 318 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FNIP2Q9P278 1114 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 REV1Q9UBZ9 1251 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 STOML2Q9UJZ1 356 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 COPS3Q9UNS2 423 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 EXO1Q9UQ84 846 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 R4GN57 208 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FER1L5A0AVI2 2057 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FASNP49327 2511 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 MPDZO75970 2070 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TCRBV21S2A2A0A5A6 115 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM72A0PK05 275 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM221A6NGB7 291 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 G3V3Y1 287 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM189-UBE2V1I3L0A0 370 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 M0R233 179 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FAAHO00519 579 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC9A3R1O14745 358 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HOXC11O43248 304 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 LANCL1O43813 399 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 NFATC1O95644 943 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SCGB1D2O95969 90 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 PTTG1O95997 202 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC2A1P11166 492 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ARSBP15848 533 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF30P17039 623 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ANXA7P20073 488 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 STOMP27105 288 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 GNG2P59768 71 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HSF2Q03933 536 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ILF3Q12906 894 aaKnown RBP eCLIP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DOC2BQ14184 412 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ELAVL3Q14576 367 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 B3GNTL1Q67FW5 361 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TUBA3EQ6PEY2 450 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF793Q6ZN11 406 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 C16orf47Q6ZP98 133 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 VWA5B2Q8N398 1253 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RELL2Q8NC24 303 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR5W2Q8NH69 310 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 GHSRQ92847 366 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CCDC115Q96NT0 180 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms