RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TRPV1Q8NER1 839 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 OR7G2Q8NG99 324 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 RHEBL1Q8TAI7 183 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 FAM110BQ8TC76 370 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 AENQ8WTP8 325 aaKnown RBP3.56□□□□□ -1.84
VPS13D-207ENST00000476169 ASZ1Q8WWH4 475 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 NRGNQ92686 78 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 BADQ92934 168 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 NUS1Q96E22 293 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 NRBF2Q96F24 287 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 MSANTD3Q96H12 275 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 ALKBH3Q96Q83 286 aaPredicted RBP3.56□□□□□ -1.84
VPS13D-207ENST00000476169 RIOK1Q9BRS2 568 aaKnown RBP3.56□□□□□ -1.84
VPS13D-207ENST00000476169 RBM4Q9BWF3 364 aaKnown RBP3.56□□□□□ -1.84
VPS13D-207ENST00000476169 IL22Q9GZX6 179 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 FBXO44Q9H4M3 255 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 ANKRD19PQ9H560 264 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 ELOVL6Q9H5J4 265 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 NT5DC2Q9H857 520 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 LYARQ9NX58 379 aaKnown RBP3.56□□□□□ -1.84
VPS13D-207ENST00000476169 SIGLEC8Q9NYZ4 499 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 GALPQ9UBC7 116 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 N6AMT1Q9Y5N5 214 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 GMPPBQ9Y5P6 360 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 PEX16Q9Y5Y5 336 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 GMEB1Q9Y692 573 aa3.56□□□□□ -1.84
VPS13D-207ENST00000476169 INSRP06213 1382 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 A0A0G2JLW4 131 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TRBV11-1A0A0K0K1C0 115 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 ZNF724A8MTY0 619 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 H3BMQ9 156 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 PDLIM1O00151 329 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 HIP1O00291 1037 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 FBP2O00757 339 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TRAFD1O14545 582 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TM9SF1O15321 606 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 RRP8O43159 456 aaKnown RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TNFSF12O43508 249 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 CLPXO76031 633 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 MAGEA9P43362 315 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TSFMP43897 325 aaKnown RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 ARRB1P49407 418 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 HLCSP50747 726 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 FOXG1P55316 489 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 KCNJ2P63252 427 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 PAX5Q02548 391 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 ILF3Q12906 894 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 KLRB1Q12918 225 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 FHL1Q13642 323 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 ANGPT1Q15389 498 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 FAM83EQ2M2I3 478 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TRIM16LQ309B1 348 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 METTL11BQ5VVY1 283 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 MLIPQ5VWP3 458 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 PAQR6Q6TCH4 344 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TRPT1Q86TN4 253 aaKnown RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TPRA1Q86W33 373 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 KCNMB4Q86W47 210 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TRIM69Q86WT6 500 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 CATSPERDQ86XM0 798 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 RNF130Q86XS8 419 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 VRK2Q86Y07 508 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 MARCH9Q86YJ5 346 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 CIARTQ8N365 385 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 OR2T33Q8NG76 320 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 OR4D9Q8NGE8 314 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 OR5AP2Q8NGF4 316 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 OR5T3Q8NGG3 340 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 SUN5Q8TC36 379 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 LRRC20Q8TCA0 184 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 LKAAEAR1Q8TD35 194 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 KIFAP3Q92845 792 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 DNAJA3Q96EY1 480 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 PLEKHA8Q96JA3 519 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 ZNF641Q96N77 438 aaPredicted RBP3.55□□□□□ -1.84
VPS13D-207ENST00000476169 OR5B2Q96R09 309 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 MAPKAP1Q9BPZ7 522 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 C19orf43Q9BQ61 176 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 WACQ9BTA9 647 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 HOXD1Q9GZZ0 328 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 PPA2Q9H2U2 334 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 LIME1Q9H400 295 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 SP140LQ9H930 580 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 LYRM4Q9HD34 91 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 NANSQ9NR45 359 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 ZFP57Q9NU63 452 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 NUP50Q9UKX7 468 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 PDE10AQ9Y233 779 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 KIF21BO75037 1637 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 DIP2BQ9P265 1576 aa3.55□□□□□ -1.84
VPS13D-207ENST00000476169 CEP162Q5TB80 1403 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 A0A0J9YYE9 177 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 IQANK1A0A1B0GTG1 560 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 A8MXQ7 604 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 ZNF749O43361 778 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 FGF17O60258 216 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 E2F6O75461 281 aa3.54□□□□□ -1.84
VPS13D-207ENST00000476169 OR2F2O95006 317 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms