RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PFDN5Q99471 154 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 CDCA3Q99618 268 aaPredicted RBP10.27□□□□□ -0.77
VAPB-204ENST00000475243 SAV1Q9H4B6 383 aaPredicted RBP10.27□□□□□ -0.77
VAPB-204ENST00000475243 KIR2DS5A0A0G2JLQ3 304 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 A0A0G2JNG1 304 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 F5H5P2 479 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 G3V3Y1 287 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 KIR2DS3K7RE56 304 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 RFXAPO00287 272 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 LYRM1O43325 122 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 MT-ND4P03905 459 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 C1SP09871 688 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 BMP2P12643 396 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 ALDH3B2P48448 385 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 GAB1Q13480 694 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 RAB31Q13636 194 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 KIR2DS5Q14953 304 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 OR2T35Q8NGX2 323 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 POC1BQ8TC44 478 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 ISG20Q96AZ6 181 aaKnown RBP10.27□□□□□ -0.77
VAPB-204ENST00000475243 BIRC8Q96P09 236 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 BTBD2Q9BX70 525 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 SLAMF8Q9P0V8 285 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 RABL2AQ9UBK7 228 aaPredicted RBP10.27□□□□□ -0.77
VAPB-204ENST00000475243 RABL2BQ9UNT1 228 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 ZNF337Q9Y3M9 751 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 MEGF11A6BM72 1044 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 BEX5Q5H9J7 111 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 FAM57BQ71RH2 274 aa10.27□□□□□ -0.77
VAPB-204ENST00000475243 ZFAND5O76080 213 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 HIST1H1TP22492 207 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 CSNK1EP49674 416 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 POU3F1Q03052 451 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 AGAP7PQ5VUJ5 663 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 AGAP6Q5VW22 663 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 DPY19L2P1Q6NXN4 242 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RFLNAQ6ZTI6 216 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 LANCL3Q6ZV70 420 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ZNF808Q8N4W9 903 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 ESX1Q8N693 406 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 HSD17B8Q92506 261 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SLAMF9Q96A28 289 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RTP4Q96DX8 246 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 AGAP4Q96P64 663 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 THAP7Q9BT49 309 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 CCL26Q9Y258 94 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 CCDC88CQ9P219 2028 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 HIDE1A8MVS5 230 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 IL13RA1P78552 427 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 LEXMQ3ZCV2 418 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 MRPL2Q5T653 305 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 OR7E24Q6IFN5 339 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ZNF529Q6P280 563 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ZNF322Q6U7Q0 402 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 TECPR1Q7Z6L1 1165 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SERPINA11Q86U17 422 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 C22orf15Q8WYQ4 148 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 PRRC1Q96M27 445 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 DNMT3BQ9UBC3 853 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 MAP1BP46821 2468 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 LOC285095A0A1B0GVY8 99 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 DRGXA6NNA5 263 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 CER1O95813 267 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ALDH3B1P43353 468 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 MARCH8Q5T0T0 291 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 NCCRP1Q6ZVX7 275 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 COX15Q7KZN9 410 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ACBD4Q8NC06 268 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 MALSU1Q96EH3 234 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SLC6A17Q9H1V8 727 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 AOAHP28039 575 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RPS18P62269 152 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 ELMOD3Q96FG2 381 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 HHIPL1Q96JK4 782 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 CTRCQ99895 268 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 FKRPQ9H9S5 495 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 CACNG2Q9Y698 323 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 LOC102725191A0A1B0GVB3 256 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RPS17P08708 135 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 GPR18Q14330 331 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ZNF679Q8IYX0 411 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 MMP21Q8N119 569 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 CBARPQ8N350 705 aaPredicted RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 COQ10AQ96MF6 247 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RLIMQ9NVW2 624 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ZNF225Q9UK10 706 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SLC6A14Q9UN76 642 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RASD1Q9Y272 281 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 GPR45Q9Y5Y3 372 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 H0YGG7 62 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 H3BNC9 293 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ARPC1BO15143 372 aaKnown RBP10.26□□□□□ -0.77
VAPB-204ENST00000475243 IFNA10P01566 189 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 IFNA17P01571 189 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 HOXB5P09067 269 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ERVFC1P60507 584 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SLX4IPQ5VYV7 408 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms