RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 TMEM44Q2T9K0 475 aa11.52□□□□□ -0.57
RNF220-211ENST00000474956 NDUFAF6Q330K2 333 aa11.52□□□□□ -0.57
RNF220-211ENST00000474956 MRPL2Q5T653 305 aaKnown RBP11.52□□□□□ -0.57
RNF220-211ENST00000474956 SMARCD3Q6STE5 483 aa11.52□□□□□ -0.57
RNF220-211ENST00000474956 DNAJA4Q8WW22 397 aaPredicted RBP11.52□□□□□ -0.57
RNF220-211ENST00000474956 WACQ9BTA9 647 aa11.52□□□□□ -0.57
RNF220-211ENST00000474956 DPH1Q9BZG8 443 aa11.52□□□□□ -0.57
RNF220-211ENST00000474956 ASB6Q9NWX5 421 aa11.52□□□□□ -0.57
RNF220-211ENST00000474956 ZSCAN5BA6NJL1 495 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 GNB5O14775 395 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 SDC3O75056 442 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 PPM1FP49593 454 aaPredicted RBP11.51□□□□□ -0.57
RNF220-211ENST00000474956 ATP12AP54707 1039 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 FXYD6P3P58550 94 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 MGAT2Q10469 447 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
RNF220-211ENST00000474956 CA13Q8N1Q1 262 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 KLHL36Q8N4N3 616 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 SLC22A18Q96BI1 424 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 LRRC61Q9BV99 259 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 MRPL39Q9NYK5 338 aaKnown RBP11.51□□□□□ -0.57
RNF220-211ENST00000474956 SPTY2D1-AS1A0A0U1RR47 76 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 SLC9B1P1A6NJY1 282 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 SOCS6O14544 535 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 WNT1P04628 370 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 M6PRP20645 277 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 GABRA3P34903 492 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 ZNF155Q12901 538 aaPredicted RBP11.51□□□□□ -0.57
RNF220-211ENST00000474956 TSPAN31Q12999 210 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 FAM53BQ14153 422 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 EOGTQ5NDL2 527 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 DCST2Q5T1A1 773 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 GRHL3Q8TE85 626 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 ANKRD9Q96BM1 317 aaPredicted RBP11.51□□□□□ -0.57
RNF220-211ENST00000474956 SAMD8Q96LT4 415 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 PTCHD1Q96NR3 888 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 DHRS9Q9BPW9 319 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 ORAI3Q9BRQ5 295 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 HCAR1Q9BXC0 346 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 RNF32Q9H0A6 362 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 MAT2BQ9NZL9 334 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 USP36Q9P275 1121 aaKnown RBP11.51□□□□□ -0.57
RNF220-211ENST00000474956 CA14Q9ULX7 337 aa11.51□□□□□ -0.57
RNF220-211ENST00000474956 C2orf74A8MZ97 194 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 PLOD3O60568 738 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 RFPL3O75679 317 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 MYF5P13349 255 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 MAKP20794 623 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 GALP22466 123 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 SLC6A1P30531 599 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 TSFMP43897 325 aaKnown RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 BTG2P78543 158 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 PRICKLE4Q2TBC4 344 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 RASSF6Q6ZTQ3 369 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 USP53Q70EK8 1073 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 C9orf62Q8N4C0 152 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 OR52N1Q8NH53 320 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 ASB12Q8WXK4 309 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 UBL7Q96S82 380 aaPredicted RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 EXTL2Q9UBQ6 330 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 SLC23A1Q9UHI7 598 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 LIPT1Q9Y234 373 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 TMEM184BQ9Y519 407 aaPredicted RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 MPDZO75970 2070 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 RP1P56715 2156 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 TNFRSF10CO14798 259 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 GALR3O60755 368 aaPredicted RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 IGKV1D-16P01601 117 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 ZGLP1P0C6A0 271 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 CTSEP14091 401 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 HK1P19367 917 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 EEF1A1P68104 462 aaKnown RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 TRAM2Q15035 370 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 WDR45BQ5MNZ6 344 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 ABHD13Q7L211 337 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 CAMKVQ8NCB2 501 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 NACC2Q96BF6 587 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 LMF1Q96S06 567 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 CCDC3Q9BQI4 270 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 PRSS27Q9BQR3 290 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 TEX12Q9BXU0 123 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 TTYH1Q9H313 450 aaPredicted RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 PIGUQ9H490 435 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 ELK1P19419 428 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 UQCRC1P31930 480 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 ANXA11P50995 505 aaKnown RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
RNF220-211ENST00000474956 GNA13Q14344 377 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 PRAMEF17Q5VTA0 474 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 NKAIN2Q5VXU1 208 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 RRM2BQ7LG56 351 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 COX18Q8N8Q8 333 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 OR52R1Q8NGF1 315 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 ZDHHC1Q8WTX9 485 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 NR4A3Q92570 626 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 PEX11GQ96HA9 241 aa11.5□□□□□ -0.57
RNF220-211ENST00000474956 TBX5Q99593 518 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms