RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, human

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-223	ENST00000474643	ZFP90	Q8TF47	636 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	GTF2H4	Q92759	462 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	RNF145	Q96MT1	663 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	TMUB1	Q9BVT8	246 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	RAD21L1	Q9H4I0	556 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	UBTD1	Q9HAC8	227 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	TPT1P8	Q9HAU6	139 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	LIPT1	Q9Y234	373 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	DTNA	Q9Y4J8	743 aa		13.58	□□□□□ -0.24
VARS-223	ENST00000474643	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643		A0A096LPI6	279 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	IGLV3-32	A0A0A0MS00	114 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	HMGN4	O00479	90 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	ANGPT2	O15123	496 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	ARHGEF9	O43307	516 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	FCMR	O60667	390 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	C1QC	P02747	245 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	OPN1LW	P04000	364 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	CD8B	P10966	210 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	UGT2B10	P36537	528 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	KIR2DL2	P43627	348 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	CCR4	P51679	360 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	COX20	Q5RI15	118 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	HBM	Q6B0K9	141 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	GTF2IRD2B	Q6EKJ0	949 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	HEPHL1	Q6MZM0	1159 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	OLIG3	Q7RTU3	272 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	GTF2IRD2	Q86UP8	949 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	ZNF610	Q8N9Z0	462 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	OR10D3	Q8NH80	312 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	OR2V1	Q8NHB1	315 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	AURKB	Q96GD4	344 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	WFIKKN1	Q96NZ8	548 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	NMUR2	Q9GZQ4	415 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	ZNF350	Q9GZX5	532 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	CACYBP	Q9HB71	228 aa	Known RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	TIGAR	Q9NQ88	270 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	SAR1A	Q9NR31	198 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	POLE3	Q9NRF9	147 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	SLC6A13	Q9NSD5	602 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	BEX4	Q9NWD9	120 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	P2RX2	Q9UBL9	471 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	LEF1	Q9UJU2	399 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	CLEC4A	Q9UMR7	237 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	CARD8	Q9Y2G2	431 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	PCDHB14	Q9Y5E9	798 aa		13.57	□□□□□ -0.24
VARS-223	ENST00000474643	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.57	□□□□□ -0.24
VARS-223	ENST00000474643	MTOR	P42345	2549 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	ABCA4	P78363	2273 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	MPDZ	O75970	2070 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643		A0A1W2PP18	115 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	CLIC1	O00299	241 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	TNFSF11	O14788	317 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	CXCL13	O43927	109 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	SMPD2	O60906	423 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	H6PD	O95479	791 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	PABPC4L	P0CB38	370 aa	Known RBP	13.56	□□□□□ -0.24
VARS-223	ENST00000474643	UBL4A	P11441	157 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	ETFA	P13804	333 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	SFTPD	P35247	375 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	EIF1	P41567	113 aa	Known RBP	13.56	□□□□□ -0.24
VARS-223	ENST00000474643	DSTN	P60981	165 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	CD226	Q15762	336 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	SYPL1	Q16563	259 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	KLHL26	Q53HC5	615 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	ANKRD34A	Q69YU3	496 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	ZNF550	Q7Z398	422 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	ZNF619	Q8N2I2	560 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	ANKFN1	Q8N957	763 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.56	□□□□□ -0.24
VARS-223	ENST00000474643	PAIP1	Q9H074	479 aa	Known RBP	13.56	□□□□□ -0.24
VARS-223	ENST00000474643	MYLK2	Q9H1R3	596 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	PLEKHF2	Q9H8W4	249 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	MED17	Q9NVC6	651 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	NDUFAF1	Q9Y375	327 aa		13.56	□□□□□ -0.24
VARS-223	ENST00000474643	MED12L	Q86YW9	2145 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	SERINC4	A6NH21	518 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	GJE1	A6NN92	205 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	EVPLL	A8MZ36	301 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	ZNF264	O43296	627 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	KIAA0513	O60268	411 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	AQP8	O94778	261 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	CSTA	P01040	98 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	FPR1	P21462	350 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	PPIB	P23284	216 aa	Known RBP	13.55	□□□□□ -0.24
VARS-223	ENST00000474643	MAGEA8	P43361	318 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	P2RX1	P51575	399 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	RAC1	P63000	192 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	ADAM8	P78325	824 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	ZNF117	Q03924	483 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	CHRNE	Q04844	493 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	MAPRE2	Q15555	327 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	PLPPR5	Q32ZL2	321 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	COQ5	Q5HYK3	327 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	PAGE3	Q5JUK9	113 aa		13.55	□□□□□ -0.24
VARS-223	ENST00000474643	TYW3	Q6IPR3	259 aa	Known RBP	13.55	□□□□□ -0.24
VARS-223	ENST00000474643	ALKBH2	Q6NS38	261 aa		13.55	□□□□□ -0.24

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