RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 KCNJ10P78508 379 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 SELENBP1Q13228 472 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 TESK1Q15569 626 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 TIGD2Q4W5G0 525 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 LRRC74BQ6ZQY2 392 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 FAM71CQ8NEG0 241 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 OR9I1Q8NGQ6 314 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 PNPT1Q8TCS8 783 aaKnown RBP10□□□□□ -0.81
CKS1B-206ENST00000474215 ZFP90Q8TF47 636 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 DYDC1Q8WWB3 177 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 ROBO4Q8WZ75 1007 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 CPNE4Q96A23 557 aaPredicted RBP10□□□□□ -0.81
CKS1B-206ENST00000474215 VPS33AQ96AX1 596 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 WFIKKN1Q96NZ8 548 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 QRSL1Q9H0R6 528 aaKnown RBP10□□□□□ -0.81
CKS1B-206ENST00000474215 SLC38A1Q9H2H9 487 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 LIME1Q9H400 295 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 TCF7L2Q9NQB0 619 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 SERINC1Q9NRX5 453 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 ACER3Q9NUN7 267 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 TESMINQ9Y4I5 508 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 CELSR1Q9NYQ6 3014 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 ANKRD17O75179 2603 aaKnown RBP10□□□□□ -0.81
CKS1B-206ENST00000474215 MED12LQ86YW9 2145 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 UQCRHLA0A096LP55 91 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 POLR3GO15318 223 aaPredicted RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 BCAS1O75363 584 aaPredicted RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 PRKD3O94806 890 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 CHRM4P08173 479 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 RYKP34925 604 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 CRATP43155 626 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 MRPL19P49406 292 aaKnown RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 MVDP53602 400 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 AQP5P55064 265 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 RAC3P60763 192 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 PPP2R2AP63151 447 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 MERTKQ12866 999 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 RNPS1Q15287 305 aaKnown RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 ZNF239Q16600 458 aaKnown RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 EXOC3L2Q2M3D2 409 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 DNAJC14Q6Y2X3 702 aaPredicted RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 HMGN2P46Q86SG4 172 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 CMIPQ8IY22 773 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 ARFGAP2Q8N6H7 521 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 RNF128Q8TEB7 428 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 CNOT9Q92600 299 aaKnown RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 CCDC28BQ9BUN5 200 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 SRXN1Q9BYN0 137 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 TPT1P8Q9HAU6 139 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 GP6Q9HCN6 339 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 EXOSC3Q9NQT5 275 aaKnown RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 INTS9Q9NV88 658 aaKnown RBP9.99□□□□□ -0.81
CKS1B-206ENST00000474215 KLHL28Q9NXS3 571 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 ST6GALNAC2Q9UJ37 374 aa9.99□□□□□ -0.81
CKS1B-206ENST00000474215 A0A1W2PNR3 127 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 CLDN24A6NM45 220 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 HRGP04196 525 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 DBIP07108 87 aaKnown RBP9.98□□□□□ -0.81
CKS1B-206ENST00000474215 TFPTP0C1Z6 253 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 ETFAP13804 333 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 IL7RP16871 459 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 ENPP1P22413 925 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 AGTR1P30556 359 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 APOBEC1P41238 236 aaKnown RBP9.98□□□□□ -0.81
CKS1B-206ENST00000474215 IST1P53990 364 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 STX1BP61266 288 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 GNA13Q14344 377 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 MAPK11Q15759 364 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 TMEM201Q5SNT2 666 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 C6orf10Q5SRN2 563 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 C3orf33Q6P1S2 294 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 SPNS3Q6ZMD2 512 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 BEND4Q6ZU67 534 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 PLEKHM3Q6ZWE6 761 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 FCRLAQ7L513 359 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 STK32CQ86UX6 486 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 SLC43A2Q8N370 569 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 ZNF563Q8TA94 476 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 ABHD3Q8WU67 409 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 CKAP2Q8WWK9 683 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 GTF2H4Q92759 462 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 NINJ1Q92982 152 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 OR5B2Q96R09 309 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 EBF4Q9BQW3 602 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 MED18Q9BUE0 208 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 KLHL4Q9C0H6 718 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 COQ10BQ9H8M1 238 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 PLEKHF2Q9H8W4 249 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 FANCFQ9NPI8 374 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 THUMPD1Q9NXG2 353 aaKnown RBP9.98□□□□□ -0.81
CKS1B-206ENST00000474215 ZNF226Q9NYT6 803 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 CALML5Q9NZT1 146 aa9.98□□□□□ -0.81
CKS1B-206ENST00000474215 CCDC168Q8NDH2 2452 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 ADAM11O75078 769 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 YES1P07947 543 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 CD1EP15812 388 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 RPS4Y1P22090 263 aaKnown RBP9.97□□□□□ -0.81
CKS1B-206ENST00000474215 DNASE1P24855 282 aa9.97□□□□□ -0.81
CKS1B-206ENST00000474215 FKBP2P26885 142 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms