RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, human

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2SURP-208	ENST00000473835	MEPCE	Q7L2J0	689 aa	Known RBP	4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	CXXC5	Q7LFL8	322 aa	Known RBP	4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	GHSR	Q92847	366 aa		4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	TBX5	Q99593	518 aa		4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	PTPN18	Q99952	460 aa		4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	PRSS27	Q9BQR3	290 aa		4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	SPRTN	Q9H040	489 aa	Predicted RBP	4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	UBQLN3	Q9H347	655 aa		4.36	□□□□□ -1.71
U2SURP-208	ENST00000473835	THSD7B	Q9C0I4	1608 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	OR6C68	A6NDL8	312 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	C5orf58	C9J3I9	102 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	RTCA	O00442	366 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	EIF1B	O60739	113 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	PRAMEF2	O60811	474 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	KDM4B	O94953	1096 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	C1orf105	O95561	183 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	EIF1	P41567	113 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	GPR4	P46093	362 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ARFIP1	P53367	373 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ERVK-25	P63136	954 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	DECR1	Q16698	335 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SLC25A25	Q6KCM7	469 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	TMEM88	Q6PEY1	159 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	BAIAP2L2	Q6UXY1	529 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	TAS1R1	Q7RTX1	841 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	HSD11B1L	Q7Z5J1	315 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ACBD7	Q8N6N7	88 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	RASGEF1A	Q8N9B8	481 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SUN3	Q8TAQ9	357 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	BRIX1	Q8TDN6	353 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ARL6	Q9H0F7	186 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	FKRP	Q9H9S5	495 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	TRIM36	Q9NQ86	728 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	FBXL4	Q9UKA2	621 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	DOCK6	Q96HP0	2047 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835		A0A1W2PS29	197 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CDHR4	A6H8M9	788 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	GABARAP	H6UMI1	98 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	AKR7A3	O95154	331 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SPDEF	O95238	335 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	RB1	P06400	928 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	MNDA	P41218	407 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	STAT5A	P42229	794 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	PNLIPRP1	P54315	467 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	UNQ9370/PRO34162	Q6UXP9	181 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	NUDT18	Q6ZVK8	323 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	MUC20	Q8N307	709 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	OR10K1	Q8NGX5	313 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ASZ1	Q8WWH4	475 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SOCS4	Q8WXH5	440 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	C4orf36	Q96KX1	117 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SLC22A12	Q96S37	553 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ZNF607	Q96SK3	696 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	IFT27	Q9BW83	186 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	NAP1L6	A6NFF2	107 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CHURC1-FNTB	B4DL54	471 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	OGG1	O15527	345 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SNAPC5	O75971	98 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	IGHV2-70	P01814	119 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ALPPL2	P10696	532 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	NRG3	P56975	720 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SRSF4	Q08170	494 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	HENMT1	Q5T8I9	393 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	C18orf63	Q68DL7	685 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	NRM	Q8IXM6	262 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	RGP1	Q92546	391 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ZC3H10	Q96K80	434 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SLC38A1	Q9H2H9	487 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835		A0A1W2PPK0	400 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	OR6C76	A6NM76	312 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CPSF4L	A6NMK7	179 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	EFCAB7	A8K855	629 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	C4orf51	C9J302	202 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	MID1	O15344	667 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	MAGEB4	O15481	346 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	PTGER1	P34995	402 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ACVR1B	P36896	505 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	HABP2	Q14520	560 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	NXPE4	Q6UWF7	544 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	GDF7	Q7Z4P5	450 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	TMEM173	Q86WV6	379 aa	Predicted RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	LILRB2	Q8N423	598 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	BBS10	Q8TAM1	723 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	NEUROD4	Q9HD90	331 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	P2RX2	Q9UBL9	471 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	B4GALT6	Q9UBX8	382 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	ICAM5	Q9UMF0	924 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	LAMA3	Q16787	3333 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	RNF222	A6NCQ9	220 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	RASGRP1	O95267	797 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CKM	P06732	381 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CLU	P10909	449 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	IRF1	P10914	325 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	CNR1	P21554	472 aa		4.35	□□□□□ -1.71
U2SURP-208	ENST00000473835	SLC3A1	Q07837	685 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms