RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 RP1L1Q8IWN7 2480 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-207ENST00000473420 FIGNL2A6NMB9 653 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 ZNHIT1O43257 154 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 WDR1O75083 606 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 GMNNO75496 209 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 FESP07332 822 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 HOXD4P09016 255 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 GABRA1P14867 456 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 POU3F2P20265 443 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 PTGER4P35408 488 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 APOBEC1P41238 236 aaKnown RBP17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 SLC1A3P43003 542 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 ZNF136P52737 540 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 CLDN18P56856 261 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 COPZ1P61923 177 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 RAC1P63000 192 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 CEACAM7Q14002 265 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 SF3B4Q15427 424 aaKnown RBP eCLIP17.14■□□□□ 0.339e-8■■□□□ 12.6
CTDSP1-207ENST00000473420 C3AR1Q16581 482 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 DNAL1Q4LDG9 190 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 CYBRD1Q53TN4 286 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 EMC4Q5J8M3 183 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 WBP2NLQ6ICG8 309 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 PLEKHM3Q6ZWE6 761 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 DOLPP1Q86YN1 238 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 OR5M1Q8NGP8 315 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 SLC7A6OSQ96CW6 309 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 PNPLA3Q9NST1 481 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 ADPRHL2Q9NX46 363 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 MAGEL2Q9UJ55 1249 aa17.14■□□□□ 0.33
CTDSP1-207ENST00000473420 MED12Q93074 2177 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 ARHGAP21Q5T5U3 1957 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 AHRRA9YTQ3 701 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 H3BML4 177 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 FRS3O43559 492 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 WISP1O95388 367 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 PRG2P13727 222 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 ME2P23368 584 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 RASSF2P50749 326 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 RGS8P57771 180 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 SELENOWP63302 87 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 BNIP2Q12982 314 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 SELENBP1Q13228 472 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 EIF2S3LQ2VIR3 472 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 GLYATQ6IB77 296 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 C3orf33Q6P1S2 294 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 RANBP3LQ86VV4 465 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 LSMEM1Q8N8F7 131 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 PRR7Q8TB68 274 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 PROX1Q92786 737 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 RELTQ969Z4 430 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 ZNF559Q9BR84 538 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 BTBD10Q9BSF8 475 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 GORASP2Q9H8Y8 452 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 EGFL7Q9UHF1 273 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 PACSIN3Q9UKS6 424 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 CAMK2AQ9UQM7 478 aa17.13■□□□□ 0.33
CTDSP1-207ENST00000473420 UBR5O95071 2799 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 TRGV8A0A0C4DH27 118 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 A0A1B0GUH1 482 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 TMEM229AB2RXF0 380 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 GYG2O15488 501 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 FMO6PO60774 539 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 TCN1P20061 433 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 FKBP2P26885 142 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 STARP49675 285 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 POLR2HP52434 150 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 MAP2K6P52564 334 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 NCALDP61601 193 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 MERTKQ12866 999 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 CBLL1Q75N03 491 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 ULK2Q8IYT8 1036 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 MEIOBQ8N635 442 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 FAM156AQ8NDB6 213 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 OR5M9Q8NGP3 310 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 ZPLD1Q8TCW7 415 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 SLC25A43Q8WUT9 341 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 LZICQ8WZA0 190 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 FAM162AQ96A26 154 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 TRIM2Q9C040 744 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 ADAM19Q9H013 955 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 MUC13Q9H3R2 512 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 SERINC1Q9NRX5 453 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 TINAGQ9UJW2 476 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 RPS6KA6Q9UK32 745 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 SLC9A8Q9Y2E8 581 aa17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 SPIN1Q9Y657 262 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 PHF3Q92576 2039 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-207ENST00000473420 GJE1A6NN92 205 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 H0Y3Z8 333 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 EFNA2O43921 213 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 NCK1P16333 377 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 ACVR2AP27037 513 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 C4orf17Q53FE4 359 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 C1QL3Q5VWW1 255 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 ZNF585AQ6P3V2 769 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 GGNQ86UU5 652 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 LILRA2Q8N149 483 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 OR52E4Q8NGH9 312 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 C12orf10Q9HB07 376 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms