RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TIGD2Q4W5G0 525 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 C3orf33Q6P1S2 294 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 LRRC74BQ6ZQY2 392 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 ANKFN1Q8N957 763 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 REXO5Q96IC2 774 aaKnown RBP20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 ITCHQ96J02 903 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 SRXN1Q9BYN0 137 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 SLC38A1Q9H2H9 487 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 COQ10BQ9H8M1 238 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 TCF7L2Q9NQB0 619 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 PLSCR4Q9NRQ2 329 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 SLC6A13Q9NSD5 602 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 CELSR1Q9NYQ6 3014 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 FAM234BA2RU67 622 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 CASKO14936 926 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 BCAS1O75363 584 aaPredicted RBP20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 SLC7A1P30825 629 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 MRPL19P49406 292 aaKnown RBP20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 SESN3P58005 492 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 STX1BP61266 288 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 PPP2R2AP63151 447 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 KCNJ10P78508 379 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 TESK1Q15569 626 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 HMGN2P46Q86SG4 172 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 RNF128Q8TEB7 428 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 ROBO4Q8WZ75 1007 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 QRSL1Q9H0R6 528 aaKnown RBP20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 EXOSC3Q9NQT5 275 aaKnown RBP20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 ACER3Q9NUN7 267 aa20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 INTS9Q9NV88 658 aaKnown RBP20.15■□□□□ 0.82
PTP4A1-203ENST00000473334 NR2F1P10589 423 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 AGTR1P30556 359 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 CCKARP32238 428 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 UGT2B10P36537 528 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 IDH3AP50213 366 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 ARFGAP2Q8N6H7 521 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 PMM1Q92871 262 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 NINJ1Q92982 152 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 VPS33AQ96AX1 596 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 EBF4Q9BQW3 602 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 SERINC1Q9NRX5 453 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 ST6GALNAC2Q9UJ37 374 aa20.14■□□□□ 0.81
PTP4A1-203ENST00000473334 A0A1W2PNR3 127 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 AGAP5A6NIR3 686 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 CLDN24A6NM45 220 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 C16orf97H3BN30 126 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 MVDP53602 400 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 PLAURQ03405 335 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 MERTKQ12866 999 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 RNPS1Q15287 305 aaKnown RBP20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 EXOC3L2Q2M3D2 409 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 GTDC1Q4AE62 458 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 C6orf10Q5SRN2 563 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 PLEKHM3Q6ZWE6 761 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 FCRLAQ7L513 359 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 CMIPQ8IY22 773 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 ZNF563Q8TA94 476 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 ABHD3Q8WU67 409 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 WFIKKN1Q96NZ8 548 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 CCDC28BQ9BUN5 200 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 LIME1Q9H400 295 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 MTHFD2LQ9H903 347 aaPredicted RBP20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 TPT1P8Q9HAU6 139 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 P2RX2Q9UBL9 471 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 EDARQ9UNE0 448 aa20.13■□□□□ 0.81
PTP4A1-203ENST00000473334 HRGP04196 525 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 ETFAP13804 333 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 RPS4Y1P22090 263 aaKnown RBP20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 RYKP34925 604 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 CRATP43155 626 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 RAC3P60763 192 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 GNA13Q14344 377 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 SLC25A43Q8WUT9 341 aaPredicted RBP20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 WDR60Q8WVS4 1066 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 GTF2H4Q92759 462 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 OR5B2Q96R09 309 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 MED18Q9BUE0 208 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 GP6Q9HCN6 339 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 KLHL28Q9NXS3 571 aa20.12■□□□□ 0.81
PTP4A1-203ENST00000473334 DBIP07108 87 aaKnown RBP20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 APOBEC1P41238 236 aaKnown RBP20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 IST1P53990 364 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 AQP5P55064 265 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 DSTNP60981 165 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 POU4F3Q15319 338 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 TMEM201Q5SNT2 666 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 STK32CQ86UX6 486 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 SLC43A2Q8N370 569 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 CNOT9Q92600 299 aaKnown RBP20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 AURKBQ96GD4 344 aaPredicted RBP20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 CCDC106Q9BWC9 280 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 KLHL4Q9C0H6 718 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 C12orf49Q9H741 205 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 FANCFQ9NPI8 374 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 ZNF226Q9NYT6 803 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 CALML5Q9NZT1 146 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 KLHL13Q9P2N7 655 aa20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 SPIN1Q9Y657 262 aaPredicted RBP20.11■□□□□ 0.81
PTP4A1-203ENST00000473334 AKAP6Q13023 2319 aa20.1■□□□□ 0.81
PTP4A1-203ENST00000473334 PRKD3O94806 890 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms