RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CLEC4FQ8N1N0 589 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 OR4A15Q8NGL6 344 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 TMEM234Q8WY98 164 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 ST8SIA1Q92185 356 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF524Q96C55 264 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 PKNOX2Q96KN3 472 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 PPP1R36Q96LQ0 422 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 LAT2Q9GZY6 243 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 QRSL1Q9H0R6 528 aaKnown RBP17.54■□□□□ 0.4
COL9A3-210ENST00000472880 SERINC1Q9NRX5 453 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 EXD2Q9NVH0 621 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 MKLN1Q9UL63 735 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 SMAD9O15198 467 aaKnown RBP17.53■□□□□ 0.4
COL9A3-210ENST00000472880 H6PDO95479 791 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 UBTFL6P0CB48 400 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-210ENST00000472880 PGCP20142 388 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 ETV4P43268 484 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 OR3A2P47893 321 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 RASGEF1BQ0VAM2 473 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 KRT71Q3SY84 523 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 ATAD3BQ5T9A4 648 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 Q6ZT83 130 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 EIF3MQ7L2H7 374 aaKnown RBP17.53■□□□□ 0.4
COL9A3-210ENST00000472880 BHLHA15Q7RTS1 189 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-210ENST00000472880 DPY30Q9C005 99 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF350Q9GZX5 532 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 OR51I1Q9H343 314 aa17.53■□□□□ 0.4
COL9A3-210ENST00000472880 FN1P02751 2386 aaKnown RBP17.53■□□□□ 0.4
COL9A3-210ENST00000472880 CENPVL1A0A0U1RR11 272 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 WDR91A4D1P6 747 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF814B7Z6K7 855 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 FCMRO60667 390 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 CYTIPO60759 359 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 UGT2B17O75795 530 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 AGR2O95994 175 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 SESN3P58005 492 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 MERTKQ12866 999 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 CHI3L2Q15782 390 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 STK11Q15831 433 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 OLIG3Q7RTU3 272 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF781Q8N8C0 355 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 OR8J2Q8NGG1 315 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 SLC25A43Q8WUT9 341 aaPredicted RBP17.52■□□□□ 0.4
COL9A3-210ENST00000472880 GTPBP3Q969Y2 492 aaKnown RBP17.52■□□□□ 0.4
COL9A3-210ENST00000472880 TRMT61AQ96FX7 289 aaKnown RBP17.52■□□□□ 0.4
COL9A3-210ENST00000472880 AKTIPQ9H8T0 292 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 PRSS50Q9UI38 385 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 KCNE5Q9UJ90 142 aa17.52■□□□□ 0.4
COL9A3-210ENST00000472880 ING1Q9UK53 422 aaPredicted RBP17.52■□□□□ 0.4
COL9A3-210ENST00000472880 ROS1P08922 2347 aa17.52■□□□□ 0.39
COL9A3-210ENST00000472880 ITM2AO43736 263 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 KIAA0513O60268 411 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 LYZL6O75951 148 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 SERPINE1P05121 402 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 FESP07332 822 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 MYZAPP0CAP1 466 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 CASP9P55211 416 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 CSNK2A1P68400 391 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-210ENST00000472880 BSPH1Q075Z2 132 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 VEZF1Q14119 521 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 SYT14P1Q58G82 188 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 ANKRD46Q86W74 232 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 VPS37AQ8NEZ2 397 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 LILRB1Q8NHL6 650 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-210ENST00000472880 MIPOL1Q8TD10 442 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 ZNF300Q96RE9 604 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-210ENST00000472880 ACER3Q9NUN7 267 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 WDR45Q9Y484 360 aa17.51■□□□□ 0.39
COL9A3-210ENST00000472880 SPIN1Q9Y657 262 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-210ENST00000472880 NUP214P35658 2090 aaPredicted RBP17.51■□□□□ 0.39
COL9A3-210ENST00000472880 A0A1W2PP18 115 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ZNF724A8MTY0 619 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 C9JVG2 144 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 INAFM1C9JVW0 142 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 SULT2B1O00204 365 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 RGS16O15492 202 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 DNAJA2O60884 412 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 OR12D1P0DN82 309 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 UQCRC2P22695 453 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 DIO1P49895 249 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 KHKP50053 298 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ABCE1P61221 599 aaKnown RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ETFDHQ16134 617 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ZNF672Q499Z4 452 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ANXA8L1Q5VT79 327 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 HEPHL1Q6MZM0 1159 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 TNFAIP8L2Q6P589 184 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 GALNT5Q7Z7M9 940 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ATG4DQ86TL0 474 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ZNF100Q8IYN0 542 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 KBTBD8Q8NFY9 601 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ZNF563Q8TA94 476 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 PIWIL2Q8TC59 973 aaKnown RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 SMAP2Q8WU79 429 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 XAGE5Q8WWM1 108 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 OIT3Q8WWZ8 545 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 NEUROG1Q92886 237 aa17.5■□□□□ 0.39
COL9A3-210ENST00000472880 ZNF775Q96BV0 537 aaPredicted RBP17.5■□□□□ 0.39
COL9A3-210ENST00000472880 POLE3Q9NRF9 147 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms