RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 LINC01560Q8TB33 94 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 SLC38A5Q8WUX1 472 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 TMEM234Q8WY98 164 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 ROBO4Q8WZ75 1007 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 ST8SIA1Q92185 356 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 CNOT9Q92600 299 aaKnown RBP11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 PAIP1Q9H074 479 aaKnown RBP11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 OPN3Q9H1Y3 402 aaPredicted RBP11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 CACYBPQ9HB71 228 aaKnown RBP11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 SERINC1Q9NRX5 453 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 THUMPD1Q9NXG2 353 aaKnown RBP11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 EMC9Q9Y3B6 208 aa11.31□□□□□ -0.6
PPP1R3F-204ENST00000471261 A8MXE2 369 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 MSTNO14793 375 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 NTN1O95631 604 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 VIMP08670 466 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 TFPTP0C1Z6 253 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 NID1P14543 1247 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 CD1EP15812 388 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 RGNQ15493 299 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 SLC25A53Q5H9E4 307 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 PAGE3Q5JUK9 113 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 MRPL2Q5T653 305 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 FBXW10Q5XX13 1052 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 C3orf33Q6P1S2 294 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 FAM214BQ7L5A3 538 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 CMIPQ8IY22 773 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 MAL2Q969L2 176 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 CPNE4Q96A23 557 aaPredicted RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 TMEM19Q96HH6 336 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 GMPPAQ96IJ6 420 aaPredicted RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 OR5B2Q96R09 309 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 SIKE1Q9BRV8 207 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 SRXN1Q9BYN0 137 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 RAD21L1Q9H4I0 556 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 RLIMQ9NVW2 624 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 SLC25A37Q9NYZ2 338 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 CALML5Q9NZT1 146 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 SLAMF8Q9P0V8 285 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 PROCRQ9UNN8 238 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 CREBBPQ92793 2442 aa11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
PPP1R3F-204ENST00000471261 POLQO75417 2590 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 A0A1W2PNR3 127 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 C5orf58C9J3I9 102 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 DNAJA2O60884 412 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 NUDT7P0C024 238 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 TROVE2P10155 538 aaKnown RBP eCLIP11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 TFPIP10646 304 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 CCNA2P20248 432 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 RPS4Y1P22090 263 aaKnown RBP11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 IRX1P78414 480 aaPredicted RBP11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 SORDQ00796 357 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 PLAURQ03405 335 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 FADDQ13158 208 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 MAPK11Q15759 364 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 EXOC3L2Q2M3D2 409 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 AP1ARQ63HQ0 302 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 GTF2IRD2BQ6EKJ0 949 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 PLEKHM3Q6ZWE6 761 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 GTF2IRD2Q86UP8 949 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 VRK2Q86Y07 508 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 MSRB3Q8IXL7 192 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 ZNF610Q8N9Z0 462 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 OR52P1PQ8NH57 321 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 FAM222BQ8WU58 562 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 STON2Q8WXE9 905 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 PMM1Q92871 262 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 DNAJA3Q96EY1 480 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 GPATCH1Q9BRR8 931 aaKnown RBP11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 SLC39A3Q9BRY0 314 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 SLC52A3Q9NQ40 469 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 CTPS2Q9NRF8 586 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 ACER3Q9NUN7 267 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 TMEM45AQ9NWC5 275 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 DNAJB12Q9NXW2 375 aaKnown RBP11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 MED12LQ86YW9 2145 aa11.29□□□□□ -0.6
PPP1R3F-204ENST00000471261 IGHV3-15A0A0B4J1V0 119 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 A0A1W2PP18 115 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 CFAP73A6NFT4 308 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ETV2O00321 342 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 AP3D1O14617 1153 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ANGPT2O15123 496 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ADAM11O75078 769 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 SS18L1O75177 396 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 CGAP01215 116 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 POU2F1P14859 743 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 UQCRBP14927 111 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms