RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ATP6V1G3Q96LB4 118 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 GAL3ST4Q96RP7 486 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 HBEGFQ99075 208 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 IFT27Q9BW83 186 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 NUDT9Q9BW91 350 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ACPTQ9BZG2 426 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CACYBPQ9HB71 228 aaKnown RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 C3orf14Q9HBI5 128 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 MRGBPQ9NV56 204 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 SLC17A7Q9P2U7 560 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 NLKQ9UBE8 527 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 B4GALT7Q9UBV7 327 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 BCAP29Q9UHQ4 241 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 DLGAP4Q9Y2H0 992 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 RAP2CQ9Y3L5 183 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CLDN16Q9Y5I7 305 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 PTPRQQ9UMZ3 2332 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 EPG5Q9HCE0 2579 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 SCN3AQ9NY46 2000 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 GOLGA8QA0A0J9YX86 632 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 C2orf92A0A1B0GVN3 265 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 GOLGA8OA6NCC3 632 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 GLOD5A6NK44 160 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 GOLGA8NF8WBI6 632 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 J3KRW8 73 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 CFLARO15519 480 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 EEDO75530 441 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 LYPLA1O75608 230 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 SOX30O94993 753 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 AIFM1O95831 613 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 KRT16P08779 473 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 LINC00032P0C843 101 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 PRPS2P11908 318 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 CPMP14384 443 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 IL12BP29460 328 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 BSGP35613 385 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 NCBP2P52298 156 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 CLNS1AP54105 237 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 SLC18A1P54219 525 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 DCAF7P61962 342 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 RPL38P63173 70 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 HMGCS1Q01581 520 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 PLGLB1Q02325 96 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 PRICKLE4Q2TBC4 344 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 SOWAHCQ53LP3 525 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 ALG10Q5BKT4 473 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF766Q5HY98 468 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 ALG10BQ5I7T1 473 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 TMEM268Q5VZI3 342 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 C18orf63Q68DL7 685 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 CLEC6AQ6EIG7 209 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 ZCCHC23Q6ZST2 131 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 EXOC3L1Q86VI1 746 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 CYP4Z2PQ8N1L4 340 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 POGLUT1Q8NBL1 392 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 HAS2Q92819 552 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 EXOSC8Q96B26 276 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 ERP27Q96DN0 273 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 MTERF3Q96E29 417 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 C19orf60Q96EN9 201 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 CSF3RQ99062 836 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 EBPLQ9BY08 206 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 PAIP1Q9H074 479 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 TMBIM4Q9HC24 238 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 FARSBQ9NSD9 589 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 INTS9Q9NV88 658 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 DDX18Q9NVP1 670 aaKnown RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 TAS2R9Q9NYW1 312 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 SLC25A10Q9UBX3 287 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-208ENST00000469585 EMCNQ9ULC0 261 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 DHDHQ9UQ10 334 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 OR10H1Q9Y4A9 318 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 ATG4BQ9Y4P1 393 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 FAM208BQ5VWN6 2430 aa5.71□□□□□ -1.5
PTCD3-208ENST00000469585 PKD1L2Q7Z442 2459 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 UQCRHLA0A096LP55 91 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 IGKV3D-11A0A0A0MRZ8 115 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 TTC36A6NLP5 189 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 TCP11X1B4DZS4 312 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 TFECO14948 347 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 TYROBPO43914 113 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 FGF17O60258 216 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 PEX11AO75192 247 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SLC25A12O75746 678 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 CBX6O95503 412 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 FGF4P08620 206 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 IL3P08700 152 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 HPGDP15428 266 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 PRPS1L1P21108 318 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 BGNP21810 368 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 FEN1P39748 380 aaKnown RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 GPR143P51810 404 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 ERVK-8P63133 956 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 LRRC74AQ0VAA2 488 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF155Q12901 538 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 KLF9Q13886 244 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 OR1C1Q15619 314 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 GPR68Q15743 365 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SMU1Q2TAY7 513 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms