RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 SLC7A1P30825 629 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 CCKARP32238 428 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 UGT2B10P36537 528 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 MAGEA8P43361 318 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 POLR2JP52435 117 aaKnown RBP16.33■□□□□ 0.2
PHGDH-204ENST00000469443 IST1P53990 364 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 SESN3P58005 492 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 TIGD2Q4W5G0 525 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 COX20Q5RI15 118 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 C3orf33Q6P1S2 294 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 DNAJC14Q6Y2X3 702 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-204ENST00000469443 SPNS3Q6ZMD2 512 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 LRRC74BQ6ZQY2 392 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 HDXQ7Z353 690 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 MIER2Q8N344 545 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 ANKFN1Q8N957 763 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 OR9I1Q8NGQ6 314 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 PNPT1Q8TCS8 783 aaKnown RBP16.33■□□□□ 0.2
PHGDH-204ENST00000469443 RNF128Q8TEB7 428 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 ROBO4Q8WZ75 1007 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 WFIKKN1Q96NZ8 548 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 SLC38A1Q9H2H9 487 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 RMND5AQ9H871 391 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 SLCO1B3Q9NPD5 702 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 SLC6A13Q9NSD5 602 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 ACER3Q9NUN7 267 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 EDARQ9UNE0 448 aa16.33■□□□□ 0.2
PHGDH-204ENST00000469443 PRRC2AP48634 2157 aaKnown RBP16.33■□□□□ 0.2
PHGDH-204ENST00000469443 C16orf97H3BN30 126 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 POLR3GO15318 223 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-204ENST00000469443 BCAS1O75363 584 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ANP32DO95626 131 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 CHRM4P08173 479 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ZCCHC18P0CG32 403 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 AGTR1P30556 359 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ART1P52961 327 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 KCNJ10P78508 379 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 MERTKQ12866 999 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 RNPS1Q15287 305 aaKnown RBP16.32■□□□□ 0.2
PHGDH-204ENST00000469443 HMGN2P46Q86SG4 172 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 GOLGA6L1Q8N7Z2 621 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ABHD3Q8WU67 409 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 DYDC1Q8WWB3 177 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ITCHQ96J02 903 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 MED18Q9BUE0 208 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 QRSL1Q9H0R6 528 aaKnown RBP16.32■□□□□ 0.2
PHGDH-204ENST00000469443 VIPAS39Q9H9C1 493 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 TCF7L2Q9NQB0 619 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 EXOSC3Q9NQT5 275 aaKnown RBP16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-204ENST00000469443 KLHL28Q9NXS3 571 aa16.32■□□□□ 0.2
PHGDH-204ENST00000469443 ITPR3Q14573 2671 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 A0A1W2PNR3 127 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 FAM234BA2RU67 622 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 AGAP5A6NIR3 686 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 HMGB1P1B2RPK0 211 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-204ENST00000469443 NR2F1P10589 423 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 CD1EP15812 388 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 MVDP53602 400 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 RAC3P60763 192 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 STX1BP61266 288 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 POU4F3Q15319 338 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 EXOC3L2Q2M3D2 409 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 PLEKHM3Q6ZWE6 761 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 FCRLAQ7L513 359 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 CMIPQ8IY22 773 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 ARFGAP2Q8N6H7 521 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 ZNF563Q8TA94 476 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 PMM1Q92871 262 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 MTHFD2LQ9H903 347 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-204ENST00000469443 TPT1P8Q9HAU6 139 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 GP6Q9HCN6 339 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 FANCFQ9NPI8 374 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 SERINC1Q9NRX5 453 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 CCM2LQ9NUG4 571 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-204ENST00000469443 PLEKHA6Q9Y2H5 1048 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 PRR14LQ5THK1 2151 aa16.31■□□□□ 0.2
PHGDH-204ENST00000469443 CLDN24A6NM45 220 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 PRKD3O94806 890 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-204ENST00000469443 RPS4Y1P22090 263 aaKnown RBP16.3■□□□□ 0.2
PHGDH-204ENST00000469443 DNASE1P24855 282 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 RYKP34925 604 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 MRPL19P49406 292 aaKnown RBP16.3■□□□□ 0.2
PHGDH-204ENST00000469443 IDH3AP50213 366 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 PPP2R2AP63151 447 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 PLAURQ03405 335 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 TMEM201Q5SNT2 666 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 PAMR1Q6UXH9 720 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 BEND4Q6ZU67 534 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 STK32CQ86UX6 486 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 SLC43A2Q8N370 569 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 SLC25A43Q8WUT9 341 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-204ENST00000469443 WDR60Q8WVS4 1066 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 CNOT9Q92600 299 aaKnown RBP16.3■□□□□ 0.2
PHGDH-204ENST00000469443 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 OR5B2Q96R09 309 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 CCDC28BQ9BUN5 200 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 KLHL4Q9C0H6 718 aa16.3■□□□□ 0.2
PHGDH-204ENST00000469443 PLEKHF2Q9H8W4 249 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms