RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RNASET2O00584 256 aaKnown RBP21.72■■□□□ 1.07
PTCH1-210ENST00000468211 SMAD9O15198 467 aaKnown RBP21.72■■□□□ 1.07
PTCH1-210ENST00000468211 STX11O75558 287 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 CNOT4O95628 575 aaKnown RBP21.72■■□□□ 1.07
PTCH1-210ENST00000468211 C1QCP02747 245 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 SERPINE1P05121 402 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 SLC7A1P30825 629 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 SMU1Q2TAY7 513 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 HEPHL1Q6MZM0 1159 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.72■■□□□ 1.07
PTCH1-210ENST00000468211 OR8J2Q8NGG1 315 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 OR4A15Q8NGL6 344 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 NEUROG1Q92886 237 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 RAB8BQ92930 207 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 OR5B2Q96R09 309 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF300Q96RE9 604 aaPredicted RBP21.72■■□□□ 1.07
PTCH1-210ENST00000468211 SORT1Q99523 831 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 HDHD5Q9BXW7 423 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 BCO1Q9HAY6 547 aa21.72■■□□□ 1.07
PTCH1-210ENST00000468211 DUXAA6NLW8 204 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 UBTFL6P0CB48 400 aaPredicted RBP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 OR12D1P0DN82 309 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 IL32P24001 234 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 SESN3P58005 492 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 ABCE1P61221 599 aaKnown RBP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 FUT5Q11128 374 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 CAPRIN1Q14444 709 aaKnown RBP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 NCMAPQ5T1S8 102 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 SLC43A2Q8N370 569 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 MIPOL1Q8TD10 442 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF75CPQ92670 426 aaPredicted RBP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 ZIM3Q96PE6 472 aa21.71■■□□□ 1.07
PTCH1-210ENST00000468211 TACO1Q9BSH4 297 aaKnown RBP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 V9GYY5 206 aaPredicted RBP21.71■■□□□ 1.07
PTCH1-210ENST00000468211 ANKRD28O15084 1053 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 CPSF4O95639 269 aaKnown RBP21.7■■□□□ 1.06
PTCH1-210ENST00000468211 CSTAP01040 98 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 OR3A2P47893 321 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 RASGEF1BQ0VAM2 473 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 KRT71Q3SY84 523 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 C3orf33Q6P1S2 294 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 WDR93Q6P2C0 686 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 TNFAIP8L2Q6P589 184 aaPredicted RBP21.7■■□□□ 1.06
PTCH1-210ENST00000468211 HMGN2P46Q86SG4 172 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 KISS1RQ969F8 398 aaPredicted RBP21.7■■□□□ 1.06
PTCH1-210ENST00000468211 ZBTB9Q96C00 473 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 ZG16BQ96DA0 208 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 DPY30Q9C005 99 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 KLHL9Q9P2J3 617 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 LAMP3Q9UQV4 416 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 RAP2CQ9Y3L5 183 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 RNF115Q9Y4L5 304 aa21.7■■□□□ 1.06
PTCH1-210ENST00000468211 HIVEP2P31629 2446 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 CLOCKO15516 846 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 CYTIPO60759 359 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 AK1P00568 194 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 DHRS4L1P0CG22 281 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 PCSK6P29122 969 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 PGM1P36871 562 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 ATP5J2P56134 94 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 PLAURQ03405 335 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 ITGADQ13349 1161 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 MPP2Q14168 576 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 P2RY6Q15077 328 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 TYW3Q6IPR3 259 aaKnown RBP21.69■■□□□ 1.06
PTCH1-210ENST00000468211 ADAM5Q6NVV9 412 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 BHLHA15Q7RTS1 189 aaPredicted RBP21.69■■□□□ 1.06
PTCH1-210ENST00000468211 C16orf62Q7Z3J2 963 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 XAGE5Q8WWM1 108 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 ST8SIA1Q92185 356 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 CXorf56Q9H5V9 222 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 ACER3Q9NUN7 267 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 DNHD1Q96M86 4753 aa21.69■■□□□ 1.06
PTCH1-210ENST00000468211 PRAMEF27A3QJZ7 478 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 BIRC5O15392 142 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 KIAA0513O60268 411 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 LYZL6O75951 148 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 SOD3P08294 240 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 MYZAPP0CAP1 466 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 DIO1P49895 249 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 MERTKQ12866 999 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 SAXO2Q658L1 398 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 Q6ZT83 130 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 MREGQ8N565 214 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 FAM71CQ8NEG0 241 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 PIWIL2Q8TC59 973 aaKnown RBP21.68■■□□□ 1.06
PTCH1-210ENST00000468211 HSD17B8Q92506 261 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 EXD2Q9NVH0 621 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 PCDHGB4Q9UN71 923 aa21.68■■□□□ 1.06
PTCH1-210ENST00000468211 CR1P17927 2039 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 PRSS51A0A1B0GVH4 220 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 DPRXA6NFQ7 191 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 FESP07332 822 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 BGNP21810 368 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 UQCRC2P22695 453 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 SLC1A6P48664 564 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 RPL14P50914 215 aaKnown RBP21.67■■□□□ 1.06
PTCH1-210ENST00000468211 BSPH1Q075Z2 132 aa21.67■■□□□ 1.06
PTCH1-210ENST00000468211 SPANXN4Q5MJ08 99 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms