RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TRIM64A6NGJ6 449 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 TRIM64BA6NI03 449 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 FOXI3A8MTJ6 420 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 ZNF724A8MTY0 619 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 TMCO5BA8MYB1 307 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 WASH3PC4AMC7 463 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 PIRO00625 290 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CHUKO15111 745 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 SLC16A4O15374 487 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 PSMD3O43242 534 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NEMFO60524 1076 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 SRPX2O60687 465 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 KERAO60938 352 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NOL4O94818 638 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CPNE6O95741 557 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 LDOC1O95751 146 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 GAS8O95995 478 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CHRNGP07510 517 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CLTAP09496 248 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 UMPSP11172 480 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 MBL2P11226 248 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 B4GALT1P15291 398 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 EZRP15311 586 aaKnown RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 CYP3A5P20815 502 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ANXA13P27216 316 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 RPA1P27694 616 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CCT6AP40227 531 aaKnown RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 TPMTP51580 245 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 C21orf59P57076 290 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NAAAQ02083 359 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NPRL3Q12980 569 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 LCP2Q13094 533 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 DNAJC3Q13217 504 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 PDE7AQ13946 482 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 PDIA5Q14554 519 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 KYAT1Q16773 422 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 HFEQ30201 348 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 C2orf76Q3KRA6 126 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 TIMM50Q3ZCQ8 353 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 REP15Q6BDI9 236 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 KDM7AQ6ZMT4 941 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CYP4V2Q6ZWL3 525 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 ERICH1Q86X53 443 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CACUL1Q86Y37 369 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 SERPINA12Q8IW75 414 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 CNTN4Q8IWV2 1026 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 EID2Q8N6I1 236 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 PSMA8Q8TAA3 256 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ERMNQ8TAM6 284 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 SCFD1Q8WVM8 642 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 PRCCQ92733 491 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 HAS2Q92819 552 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ERGIC2Q96RQ1 377 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 RANBP9Q96S59 729 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 SSX3Q99909 188 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NTMT1Q9BV86 223 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NUP58Q9BVL2 599 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 NACA2Q9H009 215 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 TSPYL1Q9H0U9 437 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 FAM212BQ9NTI7 297 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 DDX19AQ9NUU7 478 aaKnown RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 GCNT4Q9P109 453 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ARMCX1Q9P291 453 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ZNF319Q9P2F9 582 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ERVK-19Q9WJR5 959 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 KCNK6Q9Y257 313 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 FOXA2Q9Y261 457 aaPredicted RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 FBXO7Q9Y3I1 522 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 OR1A2Q9Y585 309 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 LRRK1Q38SD2 2015 aa2.47□□□□□ -2.01
XRN1-206ENST00000467077 ZFC3H1O60293 1989 aaKnown RBP2.47□□□□□ -2.01
XRN1-206ENST00000467077 GOLGA4Q13439 2230 aaKnown RBP2.46□□□□□ -2.01
XRN1-206ENST00000467077 DOCK9Q9BZ29 2069 aa2.46□□□□□ -2.01
XRN1-206ENST00000467077 NBPF19A0A087WUL8 3843 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 SPENQ96T58 3664 aaKnown RBP2.46□□□□□ -2.02
XRN1-206ENST00000467077 NAV2Q8IVL1 2488 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 ACACAQ13085 2346 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 CACNA1EQ15878 2313 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 FAM47DPA6NHR8 397 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 NEDD8-MDP1E9PL57 170 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 E9PMD0 336 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 LAD1O00515 517 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 E2F3O00716 465 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 DFNA5O60443 496 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 HUS1O60921 280 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 OLFM2O95897 454 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 PNPP00491 289 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 EPOP01588 193 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 PIGRP01833 764 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 LYNP07948 512 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 GSTA2P09210 222 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 GIG44P09565 113 aaPredicted RBP2.46□□□□□ -2.02
XRN1-206ENST00000467077 OR9G9P0C7N8 305 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 P4HA1P13674 534 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 PSMA5P28066 241 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 ACADVLP49748 655 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 ACOT2P49753 483 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 FHITP49789 147 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 TNFSF10P50591 281 aa2.46□□□□□ -2.02
XRN1-206ENST00000467077 CCR4P51679 360 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms