RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC25A25Q6KCM7 469 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 LGALS14Q8TCE9 139 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 ZFPM2Q8WW38 1151 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 TFGQ92734 400 aaPredicted RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 SMIM19Q96E16 107 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 CNRIP1Q96F85 164 aaPredicted RBP18.3■□□□□ 0.52
SDF4-205ENST00000465727 NOX3Q9HBY0 568 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 NTNG1Q9Y2I2 539 aa18.3■□□□□ 0.52
SDF4-205ENST00000465727 MYO10Q9HD67 2058 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 A0A0B4J203 849 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 OGG1O15527 345 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 VEGFDO43915 354 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 KRT33AO76009 404 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 CD1AP06126 327 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 LPLP06858 475 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 TEAD1P28347 426 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 PYCR1P32322 319 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 GPR1P46091 355 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 FXYD6P3P58550 94 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 SEC61A1P61619 476 aaKnown RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 KRT33BQ14525 404 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 CCDC116Q8IYX3 515 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 CMTM4Q8IZR5 234 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 NUP43Q8NFH3 380 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 OR5K2Q8NHB8 316 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 PHYHIPQ92561 330 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZNF416Q9BWM5 594 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 CA10Q9NS85 328 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 WBP1LQ9NX94 342 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 MED11Q9P086 117 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZNF69Q9UC07 566 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZNF443Q9Y2A4 671 aaPredicted RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 SLC35A3Q9Y2D2 325 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 MDC1Q14676 2089 aaKnown RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 LRIT2A6NDA9 550 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 PDCD5O14737 125 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 HIST1H2ABP04908 130 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 CSNK2A2P19784 350 aaPredicted RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 FOXK2Q01167 660 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZC3H14Q6PJT7 736 aaKnown RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 RPTNQ6XPR3 784 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZNF793Q6ZN11 406 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 NUDT18Q6ZVK8 323 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 HIST3H2AQ7L7L0 130 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 COQ8AQ8NI60 647 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 SMPDL3BQ92485 455 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 CNOT9Q92600 299 aaKnown RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 HIST1H2ACQ93077 130 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 NRIP3Q9NQ35 241 aa18.29■□□□□ 0.52
SDF4-205ENST00000465727 ZNF223Q9UK11 482 aaPredicted RBP18.29■□□□□ 0.52
SDF4-205ENST00000465727 A0A0G2JN53 185 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 ANTXRLA6NF34 631 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 DUXAA6NLW8 204 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 GABRA1P14867 456 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 SLC2A5P22732 501 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 ATP5A1P25705 553 aaKnown RBP18.28■□□□□ 0.52
SDF4-205ENST00000465727 MPIP34949 423 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 RAD52P43351 418 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 ZNF157P51786 506 aaPredicted RBP18.28■□□□□ 0.52
SDF4-205ENST00000465727 SLC16A1P53985 500 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 EIPR1Q53HC9 387 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 PARS2Q7L3T8 475 aaKnown RBP18.28■□□□□ 0.52
SDF4-205ENST00000465727 PDZD9Q8IXQ8 264 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 LINC00518Q8N0U6 118 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 OR5J2Q8NH18 312 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 THEM6Q8WUY1 208 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 FCAMRQ8WWV6 532 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 NUS1Q96E22 293 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 MRGPRX3Q96LB0 322 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 SEC22CQ9BRL7 303 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 ACTRT3Q9BYD9 372 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 DPH1Q9BZG8 443 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 PCDHB16Q9NRJ7 776 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 LRRK1Q38SD2 2015 aa18.28■□□□□ 0.52
SDF4-205ENST00000465727 ANKRD20A5PA0PJZ0 165 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 GLOD5A6NK44 160 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 RIIAD1A6NNX1 92 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 AGR2O95994 175 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 MRPL3P09001 348 aaKnown RBP18.27■□□□□ 0.52
SDF4-205ENST00000465727 CLTBP09497 229 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 MAPK3P27361 379 aaPredicted RBP18.27■□□□□ 0.52
SDF4-205ENST00000465727 KIAA1024LP59773 190 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 CRHR2Q13324 411 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 GK2Q14410 553 aaPredicted RBP18.27■□□□□ 0.52
SDF4-205ENST00000465727 CDK5R1Q15078 307 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 TMEM255AQ5JRV8 349 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 HEPHL1Q6MZM0 1159 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 MTFR2Q6P444 385 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 ALKAL2Q6UX46 152 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 APOOLQ6UXV4 268 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 TMUB2Q71RG4 321 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 C11orf96Q7Z7L8 435 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 RANBP3LQ86VV4 465 aaPredicted RBP18.27■□□□□ 0.52
SDF4-205ENST00000465727 SYS1Q8N2H4 156 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 OR13C5Q8NGS8 318 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
SDF4-205ENST00000465727 MRI1Q9BV20 369 aa18.27■□□□□ 0.52
SDF4-205ENST00000465727 OR51V1Q9H2C8 321 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms